Thamnophis sirtalis (common garter snake): 106548640
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Entry
106548640 CDS
T06107
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106548640 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106548640 (SIN3A)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106548640 (SIN3A)
REST complex
106548640 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106548640 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
CPDase
DUF6706
Motif
Other DBs
NCBI-GeneID:
106548640
NCBI-ProteinID:
XP_013921538
UniProt:
A0A6I9YBN6
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MKRRVEEQDSPVYASQQRRIASSGEPFQHQHRVLAPAPPVYEPVSETMQSATGIQYSVTP
TYQVSTVPQSSNXXXXXXXXVHSGHHHPAPVQPHGSQVVQSHAHPTPPAAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQRYKEWLLFPPFFCICFYFPIFDG
NPTVTLLSKTTAEKVESVRNDHGGTIKKPQLNSKQQRPNQNGCQIRRHATPGVTPPVKKK
PKLLNLKDPSFAEAGKHGTESLFFDKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQL
VSPFLGKFPELFTWFKNFLGYKESSHLESFPKERATEGIAMEIDYASCKRLGSSYRALPK
SYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVL
ETNLATIRVLETIQKKLSRLSAEEQAKFRLDNTLGGSSEVIHRKALQRIYADKAADIIDG
LRKNPAVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKV
LRSKSLLSEIETIYDERQEQTSDDSSGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKE
DKYKIKQIMYHFIPDLLFAQRGELSDLEEEEEEEMDVDESSGAVKKHNGVGGSSPKAKLL
FSGTVAQKLRSLDEAYNLFHVNNNWYIFLRLHQILCLRLLRIYSQAERQIEEDSREREWE
REVLGVKREKSDSPAIQLRLKDPMDIEVEDYYPAFLDMVRNLLDGNMDSSQYEDSLRDMF
TIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTELYLSESHNGATGGLLTSQPSRSLVE
TAYQRKAE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgagtggaggaacaggactcccccgtctacgcgtcccagcagaggcgcatc
gccagcagcggcgagcccttccagcaccagcaccgcgtgctcgctccagccccccctgtc
tatgaacctgtttcggagaccatgcaatccgctaccgggatccagtactcggtcactccc
acctaccaggtgtccaccgttccccagagctccaacnnnnnnnnnnnnnnnnnnnnnncc
gtccacagtgggcatcatcaccccgccccggttcagccccacgggagccaagtggtgcag
agccacgcccacccgacgccaccagcggcaccagtccaagggcagcagcagttccagagg
ctgaaggtcgaagatgctctctcttaccttgaccaggtgaagctgcaattcggtagccag
cctcaagtctacaatgatttcttggacataatgaaggagtttaaatctcaaaggtataaa
gaatggctgcttttccccccctttttttgcatttgtttttattttcctatatttgatggg
aatccaaccgttacgctcttgagcaagaccacggcggagaaagtggagtcggtgagaaac
gaccacggaggcaccatcaagaagccccagctgaacagtaagcagcagaggcccaatcag
aatggctgtcaaatccggaggcacgccactccgggggtcaccccgccagtgaagaagaag
ccaaagctccttaatttgaaggacccatcctttgcagaagctggcaaacacggcacagag
tctctgttctttgacaaggtccgcaaagcactgcgcagcacggaggcctacgagaatttc
ctccggtgcctcgtcattttcaatcaggaggtcatatcccgagctgagctggtccagctg
gtttctccctttctgggaaaatttccggagttgttcacttggtttaaaaacttcctgggt
tacaaagaatcctctcacctggaaagctttccgaaggagcgagcgaccgaggggatagcg
atggagatagactacgcttcctgcaaacggctgggctccagctaccgagccttgcccaaa
agctaccagcagcccaaatgcacgggtcgaacgccgttgtgcaaggaggttttgaatgac
acctgggtctccttcccctcctggtccgaagattctacgtttgtgagctcgaagaagact
cagtatgaagagcacatctaccgatgtgaggatgaacggtttgagctggacgtggtcctg
gagactaacctggccaccatccgcgtcttggaaacgatacaaaagaaactctcccgctta
tcggccgaagagcaggccaaattccgcctcgacaacaccttggggggctcctccgaagtc
atccaccgcaaagccctgcagaggatatacgcggacaaagcggccgacatcatcgacggc
cttcggaagaatcccgccgtggctgtccccattgtgctgaaaaggttgaaaatgaaagaa
gaggaatggcgggaagcccagaggggattcaacaaagtgtggcgggaacagaacgagaaa
tactatttgaaatccctggaccatcaaggcatcaactttaagcagaacgacacgaaggtc
ttgcggtccaagagcctgctcagcgagattgagaccatctacgatgaaaggcaagaacag
acctcggacgacagcagcggccctcacctctccctggcctacgaggacaagcagattctg
gaggacgccgcctccctgatcatccaccacgtgaagcgccagacgggcatccagaaagag
gacaagtacaaaatcaagcagatcatgtaccacttcatcccggacctcctcttcgcccag
cgaggggagctctccgacctggaggaggaagaggaggaggagatggacgtggacgaaagc
tccggggcggtgaagaagcacaacggggtggggggcagctcccccaaagccaagctgctc
ttcagcggcacggtggctcagaagctgcgcagcctggacgaggcctacaacctcttccac
gtcaacaacaactggtacatcttcctgcggctccaccagatcctttgcctgcggctgctg
cggatatacagccaggccgagcggcagatcgaggaggacagccgggaacgggagtgggaa
cgggaagtgctgggggtgaagcgagagaagagcgacagtccagccatccagctgcgcttg
aaagaccccatggacatcgaggtggaagattactacccggctttcctggacatggtgcgg
aacctcctggatggcaacatggactcctcccaatatgaggactccctgcgtgacatgttc
accattcacgcctacatcgccttcaccatggacaagctcatccagagcattgtcagacag
ctccagcacatagtgagtgacgaaatctgcgtgcaggtaaccgagctctacctgtccgag
agccacaacggtgccacgggagggctgctgacctcacagccctctcgctccctggtggaa
acggcctaccagcgcaaagccgag
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