Thamnophis sirtalis (common garter snake): 106548849
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Entry
106548849 CDS
T06107
Name
(RefSeq) uncharacterized protein LOC106548849
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106548849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106548849
Membrane trafficking [BR:
tsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106548849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
PH_5
DUF7790
Motif
Other DBs
NCBI-GeneID:
106548849
NCBI-ProteinID:
XP_013921812
UniProt:
A0A6I9YCF5
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MNKELERCTVEQRLQHGEDADQTVMSHDSCSRTKTENMTAWQNGLGNATSVICIVMDNKE
SGSSTTSLCHHGGISTNNKNGNNNQDDKTSPSKIMHFFPTPRKRSSSNVERPRSVILMGN
SSTWNALSSLRKMGSFKKLKSSVLQGIPAKEDPDSLKDSLSENKTKKYIPNNTTVRVQTN
RYSYSGPLNDSATDNTVVSDNSDGEEDSFLRNTHRSRSIRRAYATGRINLLDGDQTQDPQ
SNTKIGSPALQESQICEIVGKDPECPKVIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKA
VNEKPLPPRTTSMSSTDSDKTNRNSERKSKRWKSPIRAKDFDRVLKLVSNVTDGALKKDC
PRTDISSPGEQNQKTRPNSRLHEDYSRRVSSSTENERRKCLPSRRHPASAPSRYTIHCSE
DDSTGSPFALSVDATGHRMSSCELSDLVCSPPPLQTPGSIPDEVFHEDFDGSKNPSSFTY
STEPPDHPARPTVPKPQSLNAESIKCNMDVHCPDRYSTLSLSSVESEGRGEGSSAKLGKS
PVCFQDSVQAVYYDDTNEDSGISSHSQLSLNLAMSADEKKEEVVTDDHWKKFPFQDEERT
DAQKVPTRRWGSGKRSRPRPLSDYGQLAIRSSSIPEDSIAMDSQEMDSLENDSETKPPPV
KSGTCAVANPKAYRRRPISVIGAISYYENNQTEEITDLLAQPVARPPVPAHQVPPYKAVS
ARIRPFTFSQSTPIGLDRVGCKRQMRASNGAADGSAESPALVDDNGSEEDYSYEELCHAN
PRYLQPGGEQLAVSELISDGNPVYAEALWDHVTMDDQELAFKAGEVIQVLEASNKDWWWG
RNEEKEAWFPASFVRLRVNQEESVEYCSGLQDEEPNVDPEKHRQKIAENKDQMRTNVIQE
IMNTERIYIKHLKDICEGYIRQCRKHTGMFTPAQLSTIFGNIEDIYKFQRKFLKDLEKLY
NKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACLELANLMKQSKYRHFFEACRLLQQM
IDIAIDGFLLTPVQKICKYPLQLAELLKYTTQDHSDYNNIKAAYEAMKNVACLINERKRR
LESIDKIARWQVSIVNWEGQDILGKSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCK
KDLLRRDMLYYKGRMDMDEMEVVDIEDGKDKDFNISIKNAFKVVNSATEEVHLFCGKKPG
DKKKWLEACANERRRVQEDKEMDLVRYFSPTTDWCTLNNK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggagcttgaaagatgcacagttgaacaaaggcttcagcatggagaagatgca
gatcaaacagtcatgagccatgactcctgttctcgtacaaaaactgaaaacatgaccgct
tggcagaatggcttgggaaatgccacctctgttatctgtatagtaatggataataaagaa
tcagggagcagtactacctctttatgtcatcatggggggatcagcacaaataacaaaaac
ggaaataacaatcaggacgataaaaccagtccttccaaaataatgcattttttccccact
ccccgcaagaggtccagctccaacgtagagcggcctcgttcagttatacttatggggaac
tcgtcaacatggaatgctttgtcttcccttagaaaaatgggatctttcaagaagttaaaa
tcatcagttctccaaggaatcccagccaaagaagatccagatagcttaaaggatagcctg
tcagagaacaaaaccaagaagtatattccaaataatacaactgtgagagttcagacaaac
agatattcttattcagggcctttaaatgacagtgccacagacaacacagtggtttctgat
aattctgatggagaggaagattccttcctgaggaacacacatcgatcacgcagtatcagg
cgtgcttatgcaactggccgtataaatttattagatggtgatcaaacccaggacccacag
agcaataccaaaataggatcccctgcattgcaggaatcccagatttgtgaaattgtaggg
aaagatccagaatgtcccaaagtgatctacaggaggagcaaaagcagcgataacctgaat
tttctcaaaaagagctcgttcaaaaggaagtcgacctcaaacctcaccgacctcaaagct
gtaaacgaaaagcctttgccaccaagaaccacgagtatgtcgtcaactgactcagacaaa
accaacaggaactcggagcggaaatcaaaacgttggaagagcccaattagagcgaaggat
tttgacagagttttgaaacttgtcagcaacgtaactgatggtgctttgaagaaggactgt
cctaggactgatatttcttcccccggtgagcagaaccaaaagacaagaccaaacagcagg
ctccatgaggactattcccgcagggtttccagcagcactgagaatgagaggcggaagtgc
ctgccatcccggcgtcacccagcttcagctccttccaggtacaccatccactgctctgag
gatgactccactggatcaccatttgcattaagtgttgatgctacaggccataggatgtct
tcctgtgaactttcagacttggtttgttctccacctccacttcaaaccccaggatcaatt
cctgatgaagttttccatgaagattttgatgggtcaaaaaaccccagctcatttacatat
agcactgagccccccgaccatcctgctagaccaaccgtccccaagcctcagagtcttaat
gccgaaagcatcaagtgcaacatggatgtccattgtccagaccggtacagtaccctgtcg
ctcagctcagtggaaagtgagggaagaggggaggggtcgtctgccaagttggggaagagt
cctgtttgcttccaggattctgtgcaagccgtctactatgacgatacaaatgaagacagt
ggcatcagcagccattctcagctgagtctcaacttagctatgagtgctgatgaaaagaag
gaagaggttgttactgatgatcactggaagaagtttccatttcaagatgaagaaagaaca
gatgctcaaaaagtcccaaccagaagatggggttctggaaaaagatctcggcctcgacca
ctctcagattatggccagttggcaattagaagttcttccattccagaagattctatcgct
atggattcccaggaaatggactctctggagaatgacagtgagaccaagcctccccctgta
aaatctgggacttgtgcagtagccaatccaaaagcctacagaagacgacccatctctgtc
attggtgcaatcagttactatgagaataatcaaacggaagaaataactgatctccttgca
caacctgtggcacggccccccgtaccagcacaccaggttcccccctacaaagctgtctca
gccagaatccgccccttcaccttttctcaaagtacccccattggtctggatagagttggg
tgtaagcgtcaaatgagagcatccaatggtgctgcagatggtagtgctgaatctccagct
ttagtcgatgataatggcagcgaagaagattacagctatgaagaactctgccatgccaac
cccaggtacttgcagcctggaggcgagcagctagctgtcagtgagctgataagtgatgga
aatccggtctatgcagaggctctctgggatcacgtgaccatggatgatcaagaattagcc
ttcaaagctggagaagtcatccaagtccttgaagcttccaacaaagattggtggtgggga
aggaatgaagagaaggaagcatggtttccagccagttttgtcagactacgagtcaatcaa
gaagaatctgtagaatactgtagtggcctccaagatgaagaaccaaatgtagatcctgaa
aagcatcgccaaaaaatagcagaaaacaaagatcagatgagaaccaatgtaattcaggaa
ataatgaacacagagaggatttatatcaaacatctcaaagacatctgtgagggatacatt
cggcaatgtcgcaaacacacagggatgttcactccagcccagctaagcaccatatttgga
aatattgaagatatttataaattccaaagaaaatttttgaaagacctagagaagctgtac
aacaaagaagagccccatttaagtgaaataggatcctgctttcttcagcatcaagaagga
tttgcgatctattctgagtattgtaacaatcaccctggagcctgccttgagctcgccaac
ctgatgaaacagagcaaatatcgccatttttttgaagcttgccgcctccttcagcaaatg
attgacattgccattgatggttttctcctcacccctgttcagaaaatctgtaaatatccc
ctgcagcttgctgaattattaaagtacaccactcaggatcatagtgactataacaatatc
aaggcagcatatgaagccatgaagaacgttgcgtgcctcatcaatgaacgcaaacgaagg
ctggaaagcatagacaagattgctcgctggcaagtctccattgtcaactgggaggggcaa
gacatcttaggcaaaagctctgaattaatccactcgggagaattgaccaaaatctccaaa
caagggaagagtcagcaaagaacattctttctttttgaccatcagcttgtgttctgcaag
aaagatttattgagaagagacatgttgtattacaaaggccggatggacatggacgaaatg
gaggtggtcgatattgaggatggcaaagacaaagactttaatatctctataaaaaatgct
ttcaaagttgtaaatagcgctacggaagaagttcacctattttgtgggaaaaagccaggt
gataaaaaaaagtggctggaagcttgtgcaaatgagaggagacgagtgcaagaagacaaa
gaaatggatctagtgagatacttcagcccaactaccgattggtgcacactcaacaacaaa
tag
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integrated database retrieval system
