Thamnophis sirtalis (common garter snake): 106548864
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Entry
106548864 CDS
T06107
Symbol
IKBKAP
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106548864 (IKBKAP)
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
106548864 (IKBKAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
106548864
NCBI-ProteinID:
XP_013921826
UniProt:
A0A6I9YCE7
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MRNLKLLRAQECHPDRALGTPQGFTIRADRGTVLISTEYGIVELDPVTQEVINKVTLTTE
GFLPEDGSGCIVGLEDLPDIESVCLATAIGDVILCNLNTHQLECVGSVDSGLSSMKWSPD
QELVLLATGEQTLILMTRDFEPIAERQIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAH
SKPKEILPALPWDDHKPRISWRGDGQYVAVSDICPGTGARKVRVWSRELILQSTSESVPG
LGQALAWKPSGSLIASTQDKVNKHDIVFIEQNGLLHGEFTLPFQKGQVKVNELLWNSDST
ILAAWVEALESDSSCQRKMYVQLWTTGNHHWYLKQSLHFGSLEGSPLLVSLVWDQEIPYR
LHVLCEQWIYLRYDWQWSIDHSTSGGANDSASVAVIDGDKVLWTAFLHAMVPPPLCTYQL
QLSSAVNQVAFSTKSQSGDLAVLDAENKLSIYRLDNHPEMDSTVKMGAVGGKRFTAAVPR
LETSYRIDLCDDKRGRNPLWLRFLTWLQDDLFLAASQCYLPMHTVIHHLKMCSTGQEGYA
NIWSPVSVDGDVISLCCNPKTKTVALQLSDGQILKYLWGAEKPVAIPWMKNNGSSVRFPS
PCMQTKLAVIDGEETIFGLTDRCRFFINDTEVSSNITSFSISDEFLLLTTHSHTCQCLPV
RNTSLKALQTGLGSTSLPKSETLRKIERGARIVTVVPQHTKLILQVPRGNLEAIHHRALV
LAQVRKWLDSLQFKEAFECMRKLRVNLNLLYDHNPKVFLNHVERFIKQIDSVNYINLFLT
ELKEEDFTKTMYPPLDLTSVNELHSSNNKKINIICDAMRQAMENISATKYYLAILTSHVK
KSPPELETALQRIRQLQGQTSETVGSVRVEEALKYLLYLVDVSELYDYSLGTYDFDLVIM
VAEKSQKDPKEYLPFLNKLKKMEINYQRYSIDKYLKRFPKALYHLSKCGSEHFPEFLNLV
VDQNLYNEALKLCLPGTQEYKTISYAYGEYLIQKHLAGQAGLIFFRCGAFEKALDAFLIS
GNWQQALCAAAELCYTEEKLASLARSMAGRLSEKRKYVDAAVLLEQYAKDYEEAILLLLE
GTAWDEALRIIYKYNRTDILETNFRPSLMEAQKNHLVFLETQKAEFSHHRKRLSIIRELK
QQAQNELLDHEASNCPESDLFSDTSSLVTASDTSSKYTHSNSRISARSSKNRRKAERKKH
SLKEGSPLEDVALLEVLGEIVRSIDNLKGEIHSLLRHLVLYSYDEQAQELQQAFEDTLHL
VESSLLEIWSPDLQHTPANSILGPNSTANSISAAYTQQKVMAPIIQDPEIFIAPKLNKNT
QWKLALLQ
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctaaaattattgagagctcaagaatgccatccagaccgagctcttggaact
cctcaaggtttcactatccgcgcagacagaggaacagtgttgatcagcaccgagtatgga
attgtggaactggatcctgttacacaggaggtcatcaacaaagttactttgacaactgag
ggttttctaccagaagatggaagcgggtgtattgtgggcctggaagatttgccagatata
gaatcggtctgtttggctacagcaattggtgatgttatactgtgcaatctaaacactcac
cagctggaatgtgttggcagtgtggacagtggcctgtcctcaatgaagtggagtcctgac
caagaacttgttcttcttgctacaggtgagcagactctgattttgatgacaagagacttt
gaaccaattgcggaaagacagattcaccaggatgattttggagaaggcaaatttattact
gttggatggggtaaaaaagaaacacagtttcatggatcggagggcaagcaagctgctcat
agcaagccaaaggaaatattgcctgctttaccatgggatgaccataaacctcggatcagt
tggagaggagatggacaatatgtagcagtgagtgacatttgcccaggaacaggagctcga
aaagtgagagtgtggagccgggagcttattctacaaagtaccagtgagtctgtcccagga
ctaggacaagcactggcctggaagccctcaggaagcttgattgcttctacacaggataaa
gtaaacaaacatgacattgtgttcatagaacaaaatgggctccttcatggtgaattcact
cttcctttccaaaaaggccaagtgaaggtaaatgagctgctctggaattctgactctaca
atattggctgcctgggtggaagcactggaaagcgacagtagttgtcaaagaaagatgtat
gtccagctgtggacaacaggaaaccatcactggtacctgaaacaaagcctgcattttggc
agcctggagggcagcccacttcttgtatccctggtgtgggatcaggagattccctatcga
cttcatgtcctctgtgaacagtggatttatcttcgctatgattggcagtggagtattgat
cacagcactagtggaggggccaatgactcagctagtgtagcagtcattgatggagataag
gttctatggacagcctttcttcatgctatggttcccccaccactttgtacatatcagctc
cagctctcctctgctgtcaatcaagttgctttctctacaaagtctcagagtggagatctt
gctgttctggatgctgaaaacaagttatccatttacagactggataatcatccagaaatg
gactctacagttaagatgggtgcagttggtggaaaaagatttacagctgcagttcctcgg
ctggaaacatcatacagaattgacctgtgtgatgacaaaagaggaagaaatccactgtgg
cttcgctttcttacttggctgcaagatgacttattcttagctgctagccagtgctacctc
ccaatgcacacagttattcatcatctgaagatgtgctccacaggacaagaaggatatgcc
aatatctggtcccctgtgagcgtggatggtgatgtgatcagcctgtgttgcaatccgaag
accaaaacagtggctctgcaactttctgatgggcaaatcctgaagtatctgtggggagct
gaaaaaccagttgctatcccctggatgaaaaataatggttcctctgttcggtttccatcc
ccctgtatgcagacgaaactagctgtaattgacggggaagaaaccatatttggcttgact
gacagatgccgtttttttattaatgatactgaggtttcttcaaatattacatccttttcc
atcagtgatgaatttctcttattgactacacattcccatacttgtcagtgcctgcctgta
aggaacacatccctgaaagctttgcaaacaggtctgggcagcacttctctccccaaaagt
gaaactctgcgcaagattgaaagaggagcccggatagtcacagttgtgccacaacacaca
aagctgatattgcaggtgccaagaggaaacttggaagctattcatcatcgagcccttgtt
ctagctcaggttcggaaatggctggatagcctccaatttaaagaagcatttgaatgtatg
aggaagctacgagtcaatctcaacttgctctatgaccacaatccaaaggttttcttaaat
cacgtggaaagatttataaaacaaattgattctgtaaattatatcaacctgttcctcaca
gaactgaaagaagaagatttcacaaaaacaatgtacccccctctggatctcaccagtgtc
aatgaattgcactcttccaataataaaaagattaatatcatctgtgatgccatgagacaa
gcaatggagaacatcagtgctactaagtactacttagccatactgacttctcatgtcaaa
aagagtcctccagaactggaaacggccctgcagagaattcgtcagcttcaaggacagact
tcagaaacagttggatctgtcagagtggaagaagcattgaaatacctcctgtatctggtg
gatgtcagcgaattgtatgattattcattggggacatatgactttgatttagtcatcatg
gttgccgagaagtctcagaaggatcctaaggaatatcttccatttttaaacaaacttaag
aaaatggaaatcaattatcagcgatattcaatagacaaatatttgaagagatttccaaag
gctctctaccaccttagtaaatgtggctcagaacattttccagagttcctaaatttggtg
gttgatcagaatttgtataatgaagccctcaagctctgtttgccaggcacacaagaatat
aagactatcagttatgcctacggagaatatttaatccagaagcatcttgctggacaagct
gggctgatcttcttccgatgtggtgcctttgagaaagctctggatgcttttctgattagt
ggcaactggcagcaggctctctgcgcagctgctgagctttgttacactgaagagaagttg
gccagcctggcaaggagcatggcaggaagactttctgaaaaaagaaaatatgtcgatgca
gcagttcttctggaacaatatgccaaggactatgaagaagccatcctgcttcttttagaa
ggaactgcctgggatgaagcattgagaataatttacaaatataataggaccgatattcta
gagaccaacttcaggccatctctgatggaagctcaaaaaaatcatttggtgttcttggaa
acacagaaagcagaattttctcaccatcgtaagcgcctatctataattcgagagcttaag
cagcaagcccaaaatgaactactagatcatgaagcatcgaattgtcctgaatcggatctc
ttttctgataccagcagtttggtgacagccagtgacacaagttccaaatatactcacagt
aattcaagaatatctgcacgttcctcaaagaaccgccgcaaggcagaacgcaagaaacac
agcctgaaggaaggaagtcccttagaagacgttgcacttctggaggttttaggggaaata
gttcgaagtattgacaacttgaaaggtgagatacacagccttttaaggcacctagtcctg
tatagctatgatgaacaagcccaggaattgcaacaggcctttgaggatacccttcacttg
gtggagagctccctgcttgaaatctggagcccagacttgcagcataccccagccaactca
atcctgggtcccaattcaactgctaatagcataagtgctgcctatactcaacagaaagtg
atggctcctataatacaagatccagagatctttattgcccccaaactcaacaaaaacact
caatggaagcttgctctgctccaataa
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