Thamnophis sirtalis (common garter snake): 106548950
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Entry
106548950 CDS
T06107
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04517
IgSF CAM signaling
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106548950 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106548950 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106548950 (SPTBN1)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106548950 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
106548950 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
SOS1_NGEF_PH
SCAR_helical
TPR_24
Motif
Other DBs
NCBI-GeneID:
106548950
NCBI-ProteinID:
XP_013921928
UniProt:
A0A6I9YCP8
LinkDB
All DBs
Position
Unknown
AA seq
2107 aa
AA seq
DB search
MILVCFSDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKY
ESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPSKFTEKGNLEVLLF
TIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRF
DRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARE
LEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEM
KVLLVSQDYGKHLLGVEDLLQKHALVEADIAIQAERVKGVNASAQKFATDGEGYKPCDPQ
VIRDRVAHMEFCYQELCQLSALRRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYG
KDLTSIVRLLSKHKAFEDEMSGRSGHFQQAVKEGEDMIAENHFGSEKIRERISDIQNQWA
NLEQLSSIRKKRLEEASLLHQFQADADDIDTWMLDILKIVSSNDVGHDEYSTQSLVKKHK
DVAEEIASYRSIIDSLHEQAKALPEEYAESIDVQSRLSGIEERYKEVAELTRLRKQALQD
TLALYKMFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNSQASRVAV
VNQIARQLIHNGHPNEKEIKAQQDKLNTRWSQFRELVDIKKDALISALSIQNYHLECNET
KSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLTDLQKEAEKLESEHP
DQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIAS
EDMPNTLMEAEKLLTQHENIKNEINNYEEDYQKMRDIGEMVTQGQTDAQYMFLHQRLQAL
DTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAA
IKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKNREVASEL
LMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELGSNK
EWLDKIQKEGMQLIAEKPETEAIVKEKLTSLHQMWQELESTTQTKAQRLFDANKAELFTQ
SCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQSQAQALS
QEGKNTDEVDGKRYTVEKKFTELLEPLNERKAHLLASKEIHQFNRDVEDEILWVGERMPI
ATSTDHGHNLQTVQLLIKKNQTLQKEISGHQPRIDDIFERSQNILTDSSLNAEAIQQRLA
DLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAV
SMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLSE
ERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTG
NIGQERVDTVNRMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH
KFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAT
RLQSAYAGDKADDIQKRENEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVRDLMLWME
DVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEI
KEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQS
VDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRLQEEEERKRQPPSPEPSPR
TGDESQWDGTKGEQVAQNGLPPDQESPRMGDGRETNEMVNGAADQRTSSKETSPVPSPTA
DRKAKSSLQAQTAATLPAKTQEIPSAQMEGFLNRKHEWESHSKKASNRSWHNVYCVINNQ
EMGFYKDAKAASSGIPYHSEVPVSLKEAVCEVAVEYKKRKHVFKLRLTDGNEYLFQAKDE
EEMNTWIQAITSAISSDKIELSTSTQSTPASNRAQTLPASVTVTSESSPGKREKDKEKRF
SLFGKKK
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgtttgcttttcagatattagtgttgaccatccagatgaaaagtccattatc
acctatgtggtaacatattaccactatttttctaagatgaaagccttagctgttgaagga
aagcgaattggaaaggtgcttgacaatgcaattgaaaccgagaagatgattgagaagtat
gagtctcttgcctctgatctccttgagtggattgaacaaaccattatcattctgaacaat
cgcaagtttgctaactcactgattggtgtgcagcaacagctacaagcattcaatacctac
cgcacagtggaaaaaccgtccaaattcacagaaaaaggaaatctggaagtattgcttttc
accatccagagtaaaatgagggctaacaatcaaaaagtgtatatgcccagagaaggaaaa
ctcatctcagatatcaacaaggcctgggaaagactggaaaaagctgaacatgaaagagaa
ctggcattgcgtaatgagctcatccgacaggagaaactggaacaacttgctcgcagattc
gaccgtaaggcagctatgcgggagacttggctaagtgaaaaccaacggctggtttctcag
gacaattttggatttgatcttccagctgtagaggctgcaacaaagaaacatgaagctatt
gagacagatattgcagcctatgaagaaagagtccaggcagtggttgctgttgccagggaa
cttgaagcagagaactatcatgatattaaacgcatcactgcaaggaaggataatgtgatt
cgcctatgggaatatctcctggagttactaagggcacgcaggcaacgactagagatgaat
cttggtctgcaaaagatcttccaagaaatgctctatattatggattggatggatgagatg
aaggtgttgctagtgtctcaagattatggcaaacatctcttgggggtagaagacctgttg
cagaaacatgctcttgtggaagccgacattgccatacaggctgagcgagtgaaaggggtt
aatgcatctgctcagaaatttgctacagatggggaaggttacaaaccctgcgatccacaa
gttattcgagaccgtgtggctcacatggaattctgttaccaagagctatgtcagctgtca
gcactacgtcgtgctcgtttggaagagtcacgacgtctttggaaattcttctgggaaatg
gctgaagaggagggatggataagagagaaggaacagatcttgtcatcagatgattatgga
aaagacttaaccagcattgtccgacttcttagcaaacacaaggcatttgaagatgagatg
agtggtcggagtggtcacttccaacaagcagtcaaagaaggggaagatatgatagctgag
aatcactttgggtctgagaagatcagagagaggatttcagatatccagaatcagtgggct
aatttggagcagctctcttccatacggaagaaacgactggaagaagcttccctacttcac
cagttccaggctgatgctgatgacattgacacgtggatgttggatatcctcaaaattgtc
tcaagcaatgatgttggccatgatgaatattcaactcaatccttggttaagaaacacaaa
gatgtggctgaagagattgcgagctacaggtcaataattgattctctgcacgaacaagct
aaagccttaccagaggagtatgcagagtccatagatgtacagagcagattgtctggcata
gaggaacggtacaaagaggttgcagaactcactcggcttcgtaagcaggcattgcaagac
actttggctttgtataagatgttcagcgaagcagatgcttgtgaactttggattgatgag
aaggaacaatggctgaataacatggagatacctgagaaactggaagatctggaagtgata
cagcacagatttgaaagtttagaaccagaaatgaatagtcaagcatcacgtgttgctgtg
gtcaatcagatagcaaggcagctgatacacaatggccatccaaatgaaaaagagatcaag
gcacagcaagataagctcaatacaagatggagccaattcagggaactggtggacataaag
aaagatgctcttatctcagctctcagtatccagaactatcatcttgaatgtaatgaaacc
aaatcttggatcagggagaaaactaaagttattgaatccacccaagagcttggtaatgac
ttggctggcgttatagctcttcagaggaagctaactggaatggaacgtgacttggtagct
attgaagccaagctcactgatctccagaaagaggctgaaaagttagaatcggagcatcct
gaccaggctcgagccattctatctaggcttgctgaaatcaatgatgtttgggaagaaatg
aaaacaactctgaagaaccgtgaagagtccttgggagaggcaagcaaactgcagcaattt
ttgcgtgacttagatgatttccagtcctggctttcccggacccaaacagccattgcctca
gaagacatgcccaatacattgatggaagcagaaaagctgcttacacagcatgaaaacatt
aagaatgaaatcaataattatgaggaagactatcagaaaatgagagatattggtgagatg
gtgacccaaggtcagactgatgctcagtacatgttcttacaccagcgtctgcaggccttg
gatactggatggaatgagcttcacaaaatgtgggaaaatcggcagaatcttctctcccag
tcccatgcctaccagttgttccttagagacacaaagcaagcagaggcatttcttaacaac
caggaatatgttttggcacatactgaaatgcccaccactttggaaggagcagaagctgct
atcaaaaaacaggaggatttcatgaccacaatggatgctaatgaggagaagatcaacgca
gttgtagagacgggaagaagactggttagtgatggcaatatcaactcagacaaaatccaa
gagaaagtggactccattgatgacagacataaaaagaatcgtgaagtagccagtgaactt
ctgatgagattaaaagacaacagagatcttcaaaagtttcttcaagattgccaagagctg
tctctctggattaacgagaagatgcttacagcacaagatatgtcttatgatgaagcacgg
aaccttcatagcaagtggctgaaacaccaagccttcatggctgagcttggctccaacaaa
gaatggcttgacaaaatccaaaaggaagggatgcagctgattgccgaaaagcctgaaaca
gaagcaattgtgaaagagaagttgacaagcctgcaccaaatgtggcaagaactggaaagc
accacccaaacaaaagctcagcggctttttgatgccaataaggctgagctgttcacacag
agctgtgctgatttagataaatggctgaatggcctggagagccagatacaatcagatgat
tatggcaaagatctcacaagtgtcaacatcttgctgaaaaaacaacagatgcttgaaaat
caaatggatgtccgtaagaaagaggttgaggagctgcagagtcaagcccaggcactgagt
caggaaggcaagaatactgatgaagttgatggtaaacgctacacagtggaaaagaaattc
acagaactgctggagcccttgaatgaaaggaaggctcacctactggcctctaaggagatc
catcagttcaaccgggatgtcgaggatgaaattttgtgggttggagagaggatgcctatt
gccacatccacagatcatgggcacaaccttcagactgttcagttgttaattaagaaaaac
cagacacttcagaaagaaatcagtggacaccagcctcgtatcgatgacatttttgagagg
agccaaaacatccttacagacagcagccttaatgccgaagcaatccagcagcggctcgca
gatttgcagcagctgtggaacctcctgattgaggagacagagaaacgccacaagcgcctt
gaggaatcccacaaagcccaacaatattattttgatgctgcggaagctgaagcctggatg
agtgaacaggagctctacatgatgtcagaagagaaggccaaggatgaacaaagtgcagtt
tctatgttgaagaaacaccagattttggaacaagctgtagaagactatgctgagacagtc
caccaactttccaagaccagcagaactttggtagcagataatcatccagagagtgaacgt
atcagcatgaggcaatcgaaagtggataaactctatgcaggcctgaaagacctttctgag
gagaggaggggcaagttggacgagagacaccggctattccagctgaaccgtgaggtggat
gacttggagcagtggatagcagaaagggaagtggtagctgggtctcacgaactgggacaa
gattatgagcatgtgacaatgttgcaagagagatttcgtgaatttgctcgagacacgggg
aatattggacaggaacgtgttgataccgtcaatcgcatggctgatgaactcattaattct
ggacattctgatgctgctactattgctgagtggaaagatggtctcaatgaggcctgggct
gacctcttggaactcattgacacaagaacacagatccttgcagcctcttatgaactacac
aaattttaccatgatgctaaggagatctttggccgaatacaggataaacataagaagctt
cctgaggaacttgggcgggatcagaacacagtagaaaccttgcaaaggatgcatacaaca
tttgaacatgacattcaggccttaggaacacaggtgaggcaactccaagaggatgctacc
cgccttcagtctgcctatgctggggacaaagctgatgatatccagaagcgggaaaatgag
gttttggaggcatggaaaaccttgctagatgcctgcgaaggacgcagggtcaggctagtg
gatactggtgacaaattccgtttcttcagtatggtccgtgacctcatgctttggatggaa
gatgtaattcgtcaaattgaagcccaagaaaagccaagggatgtttcttctgtagaactg
ctgatgaataatcatcaagggatcaaagcagaaatagacgcccgaaatgatagctttaca
acctgcattgagcttggtaaatcattgctggcaagaaaacactatgcttcagaagagata
aaagagaagttactgcaattgacagaaaaaagaaaagaaatgattgacaaatgggaagac
agatgggaatggctgagattgattctggaagtacaccagttttcaagggatgccagtgtt
gctgaggcctggctgttgggacaggagccgtatttatcaagtcgtgaaatagggcaaagc
gtggatgaagtggagaagctcatcaagaggcatgaagcctttgaaaaatcagccgcaact
tgggatgaaagattttcagcacttgaaagacttaccacgttggaattgttggaagtacgt
agactgcaagaggaagaggaacggaagagacagcctccttctccagagccaagccccaga
actggggacgagtctcagtgggatggcacaaaaggagaacaggttgcccagaatggtttg
ccaccagaccaggaatctccccggatgggagacggaagagaaaccaatgaaatggtcaat
ggtgcagcagaccagaggacaagttccaaagagacaagtccagttccttcaccgacagct
gatcgcaaagccaagagcagcctccaggctcaaaccgctgccacccttccagccaaaacg
caagaaataccttccgcccagatggagggcttcttaaatcgtaagcatgaatgggaatca
cacagcaagaaagcctcaaacagatcatggcataatgtttactgtgttattaacaaccaa
gaaatgggtttctacaaagatgcaaaagcagcgtcctcaggcattccataccacagtgag
gtccctgtgagcctgaaagaagcagtatgtgaagtggcagtggagtacaagaagaggaag
cacgtattcaagttaaggttaactgatggcaatgaataccttttccaagccaaagatgaa
gaggaaatgaacacatggatccaggccatcacatctgccatctcctcagacaaaattgag
ttgtccacaagcacacagagcaccccagcttcaaaccgtgcccagaccttgccagccagc
gtgacagtaaccagtgagtctagtcctggcaaacgggagaaagacaaagagaagaggttc
agcctttttggaaaaaagaagtga
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integrated database retrieval system
