Thamnophis sirtalis (common garter snake): 106548955
Help
Entry
106548955 CDS
T06107
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106548955 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106548955 (SFPQ)
03041 Spliceosome [BR:
tsr03041
]
106548955 (SFPQ)
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106548955 (SFPQ)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106548955 (SFPQ)
Spliceosome [BR:
tsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106548955 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
106548955
NCBI-ProteinID:
XP_013921943
UniProt:
A0A6I9YCR4
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSRDRFRSRGGGFHRRGGGGGRGGLPGNHDFRSPPPAIGGGMGQSRGGHHHIGGSGPAKP
EPPKPPSSTSTPPSSAASVSSSPAASSPSLGPNQNQIGAPPATSSSASSIATPSSVSAPA
APSGLQSGGRGGETQPPQQQSNAPPNQSSGQGGSKKGPGPSPGGGGGPIGGLKGGPGGPQ
PGGGPKSGGGPGQQHRGGERRGGQSQHQHSSQHQHPPPSQQQGAGDEKISDTEGFKANLS
LLRRPGEKKYTQRCRLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRA
LAEIAKAELDDIPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEDAFSQFGPIERAIVI
VDDRGRSSGKGIVEFASKPAARKAFERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKL
AQKNPMYQKERETPPRFAQPGSFEYEYSQRWKSLDEMEKQQRDQVEKNMKDAKDKLESEM
EDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQR
EMEEQMRRQREESYTRMGYMDPRERDMRMGGTSAMNMGDPYGTTAQKFPPLAGGTGLGYE
TNPGVGQTSMSGTMMGSDMVKIISAG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagatcgttttcggagccgcggcggcggcttccaccggcgcggcggcggcgga
ggccggggcggcctcccgggcaaccatgacttccgttcgccgccgccagccatcgggggc
ggcatggggcaatcgcgcggcggccaccaccatatcggcggcagcggccctgcgaagccg
gagcctcctaagccgccgagctcgacctccaccccaccttcctccgcggcctctgtttcc
tccagcccggcagcctcgtcgccttccttggggccgaaccagaaccagatcggcgcgccg
cccgccacctcatcctccgcctcttccatcgccacaccgagttcggtctccgcgcccgcc
gctccctcagggctccagagcggcgggcgaggcggggaaacgcaaccgccgcagcagcag
agtaacgcgccgccgaaccaaagctctgggcagggcggctccaagaaaggacctggcccg
tctcccggaggagggggaggacccatcggtggcctgaaaggaggccccggagggccccag
ccaggaggcggccccaagagtggcggcgggcctgggcagcaacaccgcggcggcgaaagg
cgcggagggcagagccagcaccagcactcgtctcagcaccagcacccgcctccgtcgcag
cagcagggcgccggggacgagaagatttccgacactgagggttttaaagcaaatctgtca
cttttgagacgccctggagagaaaaaatatactcagcgctgccggctgtttgttgggaat
ttgcctgctgatatcaccgaagatgagtttaagagattattcgccaaatatggtgaacca
ggggaagtctttattaacaagggaaaaggttttggctttattaaactggaatctagagct
ttggctgaaattgcaaaggcagaacttgatgatattcctatgagaggaaggcagcttcgt
gtgcgttttgccacccatgctgctgctctttctgtgcgtaatctctccccatatgtgtca
aatgaattgttggaagatgctttctctcagtttggtccaattgaaagagctattgtgata
gtagatgatcgtggcagatcctcaggaaagggcattgtggaatttgcatctaagcctgca
gcgcgaaaggcatttgaacgttgtactgaaggtgtctttcttctgacaaccactcctagg
ccagttattgtagagccccttgaacagttggatgatgaagatggtcttccagaaaagctg
gctcagaaaaatccaatgtatcaaaaggagagagaaactccaccacgatttgcgcaacct
ggaagttttgagtatgaatattctcaacggtggaaatccttggatgaaatggagaaacag
cagagagatcaagtagagaaaaatatgaaagatgccaaggacaaactggaaagcgagatg
gaggatgcttatcatgagcatcaggcaaaccttttacgccaagatctcatgagacgtcaa
gaggaactgagacgcatggaagaacttcacaatcaagagatgcagaaacgaaaagaaatt
caattgaggcaagaagaagagcgacgtaggcgggaagaagagatgatgatccgtcaacgt
gagatggaagaacaaatgagaagacagagagaagaaagctacactcgaatgggttatatg
gatcctagagaaagagacatgagaatgggcggtaccagtgcaatgaacatgggagatccc
tatggtacaactgctcagaaattcccaccattagcaggtggcactggccttggttatgag
accaatcccggagttggacaaacatctatgagtggcactatgatgggaagcgatatggtg
aagataatatcagctggatga
DBGET
integrated database retrieval system
