Thamnophis sirtalis (common garter snake): 106549031
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Entry
106549031 CDS
T06107
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106549031 (MMS19)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106549031 (MMS19)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106549031 (MMS19)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
106549031 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
TOR1L1_N
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
106549031
NCBI-ProteinID:
XP_013922025
UniProt:
A0A6I9YDC2
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MKLVWPSAKLLQAAAGASLRAYYQITSSVLPLLLEQYAKHEQSSQHRTVLEVLLGFLELR
QIWGPEEEDKSPLLSCKDSLCSVVFSALAEPNIQLQLVGIQILTFLGSHKELLDLADVEK
LADHFAQSILNEKDSQISLAAMDAAGTLAPVYPEIFSKYLVQKFSKGLESELQDSISSHQ
KHLQALAAVSTHPSIIRQTVPILLQHLQQIQKGKRPANNNSVVSVCHSLQQVALQCQQNA
QTYWYFHQAVVPCLLGLAVQAALEENSQTTLDKVLLTEEALSSIVLVISAACMHLSPELA
AQSVSKVVPLFLDGELSFLPGNNYPSPFHPFQDGPCPVAAPRRLVALLMAFVCSLPRTVA
IPQQDRLLRELLALSCSCDCPFTATAAAKCFAGLINKYPEGPHLDQLLEMAMKMLEQGLN
EGPYQRQALTLLLWVSKALLLRYHPLITQLTDKLLQLLGDTVLGPAVGDGFALLMADSTD
VLGKSCHAEVRLMFRQHFFTDCVPQLVQHFHTSTPDVKPNYLKGLSHILNHLPKPVLVTE
LPTLLPLLLESLSCSDHVVQLSTLRCVQPLLLDAPHVMHLHIDTLVGKFLNLTDNSAMAI
RIAALQCLHALASLPTPVVIPFKPRVIRALAKPLDDKKRLVRKEAVIARGEWFLLGTPGR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtgtggccaagcgctaaactcttgcaggcagctgcaggagcttctttgcgg
gcttattaccagatcacaagtagtgtacttcctttgctgttggagcagtatgccaagcat
gagcagagtagtcagcacaggacagtcttggaggtgttgcttggtttcttggagttgcgg
caaatttggggtcccgaggaggaagacaaaagtccactgctttcttgcaaagactctttg
tgctctgtagtattctctgccttagctgagcccaatattcaacttcaattggttgggatc
cagattctgacatttctaggatctcataaagagcttctggatcttgcagatgtggaaaag
cttgcagatcactttgcacagtccatcctgaatgaaaaggattcccagatcagtttggca
gctatggatgctgctggcacccttgcgcctgtctacccagaaatcttcagcaagtatttg
gttcagaagttttcaaaaggactggagtcagaacttcaggacagtatttcttcccatcag
aaacatctacaagctctggcagcagtgtccacccatcctagtattataaggcaaactgtt
cctatcctcctgcaacatcttcagcagattcagaaaggtaaaaggccagcaaataataat
tcagtggtatctgtgtgccacagcttgcaacaggtcgcccttcagtgccaacaaaatgct
cagacatactggtatttccatcaggcggtggtgccctgtttgctaggcttagcagtacaa
gctgctttggaagaaaattctcaaacaacacttgacaaagttctgctaacagaagaggct
ttatcatccatagtgttagtcatcagtgcagcctgcatgcacttaagcccagagttggct
gcccagagtgtgtccaaagtggtacctctcttcctggatggagaactttccttcttgcct
ggaaacaactatcctagcccttttcatccctttcaggatggaccatgtccggtggcagcc
ccaagaagactggttgctctccttatggcctttgtatgttcactgccaagaacagtggca
attcctcagcaggatcggttgctgcgtgagctactagctcttagctgttcctgtgactgc
ccattcactgctactgccgctgccaaatgctttgcaggactgattaacaaatacccagaa
gggccacacttagatcagctcttggaaatggccatgaaaatgttggaacaaggcttgaat
gaaggtccctatcaacgccaggcccttactctgctgttgtgggtgagtaaagcgttgttg
ctacgctaccacccattaatcacacagctgactgacaagctactccaactcttgggggac
actgttcttggccctgcagtgggcgatggctttgctttgctcatggctgattctactgat
gtattgggcaagagctgtcatgctgaggtgcgtctcatgttccgccagcatttcttcact
gattgtgtgccccagttggtgcaacatttccacacatctactcctgatgtgaaaccaaat
tacctgaagggcctgtctcacatattaaatcacttgcccaagccagtgctagtaacagag
ctgcctacattgctgcctctgttgctagagtctctgtcatgttctgaccatgtggtgcag
ctttcaactttacgctgcgtacagccattgctacttgatgcacctcatgttatgcatctc
cacatcgacacccttgtgggcaagtttcttaacctaacagacaattctgccatggcaatc
cgtattgctgcacttcagtgcctccatgcacttgcctccttacctaccccagtggtgatc
ccattcaagccacgagtcattcgagcattggccaagcctttggatgacaagaagcgcctt
gtacgtaaagaagctgtcatagcacgaggagaatggtttctgcttgggacacctggcagg
tga
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