Thamnophis sirtalis (common garter snake): 106549068
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Entry
106549068 CDS
T06107
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106549068 (RBM39)
Spliceosome [BR:
tsr03041
]
Common components
Common spliceosomal components
General mRNP proteins
106549068 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
DUF2332
Motif
Other DBs
NCBI-GeneID:
106549068
NCBI-ProteinID:
XP_013922097
UniProt:
A0A6I9YD68
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPFKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRE
RERKKSKSRERKRSKSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAMRGKMGLPHSMKI
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDNDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLATQCFQL
SNMFNPQTEDEAGWDTEIKDDVIEECNKHGGVVHIYVDKNSTQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPTRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgctcgaagccccctttaagaaggatgagaac
aaattgagcagtgccaatggacatgaagagcgaagtaagaagaggaaaaaaagcaagagc
agaagtcgtagtcatgataggaagagaagccgcagcaaggagcgcaaacgaagccgtgaa
cgtgaaagaaaaaaaagcaagagtcgagaaagaaagcgcagtaaaagtaaagaacggaga
cgtagccgttcaagaagcagagaacgccgattcagaggccgttacagaagtccctattct
ggtccaaagttcaatagtgccatgagaggaaaaatgggcttgccacacagcatgaaaata
agcagacgtcgatctaggagcaaaagtcctttcagaaaagacaaaagccctgtaagagag
cctattgataatcttactccagaggaacgggatgctcgaacagtattctgcatgcagctt
gcagcaagaattaggccaagagacctggaagaatttttctctactgtaggaaaggtccgt
gatgtacgcatgatatcagatagaaattcaagacgttcaaaaggaattgcttatgtagaa
tttgttgatgtcagctcagttcctttggccattggattaactggacagcgagtgttggga
gtgccaattattgtacaagcatctcaggcagagaaaaacagagcagcagcaatggctaat
aacttacaaaagggaagtgcaggccccatgagactctatgtaggctcgttacatttcaat
ataactgaagatatgcttcgtggaatctttgaaccatttggccggattgaaagcattcag
ctaatgatggacagtgaaactgggaggtccaaaggatatggatttattactttttcagac
tcagaatgtgctaaaaaggccttggaacaattaaatggatttgaattggcaggtaggcca
atgaaagtaggacatgtgactgaacgtacagatgcatccagtgccagttcatttttggac
aatgatgaattggaaaggactggaatagatttgggaacaactggtcgtcttcagttgatg
gcaagacttgctgagggtacaggtttgcagattcctccagctgcccagcaagcactgcaa
atgagtggatcattagcatttagtgctgtagcagatttacagacaagactttctcagcaa
agtgaagtcttggctgcggctgcttctgtacaaccacttgcaacacaatgctttcagctg
tccaatatgtttaaccctcaaactgaagacgaagctggctgggatacagaaattaaagat
gatgtaattgaagaatgtaacaagcatggaggtgttgtccacatttatgtagacaaaaat
tcaactcagggcaatgtgtatgtcaaatgcccttcaatagctgcagcaattgcagctgtc
aacgcattacatggaagatggtttgcaggtaaaatgatcacagcagcatatgttcctctt
ccgacataccataatcttttcccagattctatgactgcaacccagctcttggttccaact
cgacgatga
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