Thamnophis sirtalis (common garter snake): 106549081
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Entry
106549081 CDS
T06107
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106549081 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106549081 (CNOT3)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106549081 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106549081 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
DUF4407
PI3K_P85_iSH2
DUF2433
Motif
Other DBs
NCBI-GeneID:
106549081
NCBI-ProteinID:
XP_013922112
UniProt:
A0A6I9YD92
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSINVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHIEDEMFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKGLHNNYHQPPPTIPPSYPMGGSSSTSSSLGNGSGSNSNGAVAGSGNASSKANPP
AGHTPTTT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagaggaagctacaaggtgagatcgatcggtgtctcaaaaaggtatcggaa
ggtgtggagcagtttgaagatatctggcagaagctccataatgcagcgaatgccaatcag
aaggagaaatatgaagccgatctgaaaaaggagattaagaagctccagagattgagggac
cagatcaagacatgggttgcatccaatgagattaaagacaaaaggcagctaatagacaac
cggaaactcattgagacgcaaatggagcggttcaaggtagtggaacgtgagaccaagaca
aaagcctactccaaagaggggctgggcctggcccagaaagtggacccagcccagaaggag
aaagaggaagttgggcagtggctgacgaatacaatagacaccttgaacatgcaggtggat
caatttgagagcgaagtggagtcactctcggtccagacgcgcaaaaagaaaggagacaag
gataagcaagaccggatcgagggcctgaagcgacacattgagaagcatcgataccacatc
cggatgctggagacaatcctgcgcatgctggacaacgactccatcaacgtggactctatc
cgcaaaatcaaggatgatgtggagtattacgtagattcttcgcaggaccccgattttgag
gagaatgagtttctctacgatgacctcgacttagaagacattccacaggcactggtagcc
acttccccacccagccatagtcacatagaagatgagatgttcaaccagtccagcagcaca
cccacctcgaccacatccagctccccaattccacctagccctgcaaactgcacaacggag
aactctgaagatgataagaaacgaggacggtcaacagacagtgaagtcagccaatcccca
gcaaagaacggttcaaaaggcctccacaacaactaccaccagcctcctcccaccatccct
cccagctacccaatgggcggcagctctagcacatcgtcctccctgggcaatgggtctggc
tccaacagcaacggggccgttgctggcagcgggaatgcaagcagcaaagctaaccctcca
gcagggcacacaccgactaccaca
DBGET
integrated database retrieval system
