Thamnophis sirtalis (common garter snake): 106549208
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Entry
106549208 CDS
T06107
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04114
Oocyte meiosis
tsr04120
Ubiquitin mediated proteolysis
tsr04218
Cellular senescence
tsr04310
Wnt signaling pathway
tsr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106549208 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106549208 (BTRC)
04340 Hedgehog signaling pathway
106549208 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
106549208 (BTRC)
04218 Cellular senescence
106549208 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106549208 (BTRC)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106549208 (BTRC)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106549208 (BTRC)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106549208 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
F-box
WD40_like
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_VPS8
F-box_5
DUF4508
DUF6188
Motif
Other DBs
NCBI-GeneID:
106549208
NCBI-ProteinID:
XP_013922273
UniProt:
A0A6I9YDN1
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MDPAEAVVQEKALKFMPRIHMPKDGFQLTSSGYQAWLKQTSSEREDCNNDEPPRKIIPEK
NALRQAYNNCTRLCLNQDTVCLGTTMKTESCVVKTKLANGSSSMIVPKQRKLSASYEKEK
ELCIKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAE
NILSYLDAKSLCSVELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYIFR
NKPPDGIMPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQ
KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGE
MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLLAALDPRAPSGTLCLRTLVEH
SGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPATQAESNRSPSRTYTYISR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgaggctgtggtacaagagaaagccctgaaattcatgccacgaatacac
atgcctaaagatggattccaacttacatcttctggataccaagcgtggctaaagcagact
tcctctgaaagagaagattgtaataatgatgagcctccaagaaagatcattcccgagaag
aatgcactcaggcaggcctataacaactgtaccagactttgcttaaaccaagacacagtc
tgcttaggtactacaatgaagactgaaagctgtgtggtcaaaacaaaacttgccaatggt
tcttcaagcatgattgttccaaaacaaagaaagctgtctgcaagctatgaaaaagaaaag
gagctctgcatcaagtattttgagcagtggtcagagtctgaccaggtagaatttgtggaa
catctcatctctcagatgtgtcattatcaacatgggcacataaattcatacttgaaacct
atgttgcagagggacttcatcacagcattaccagctcgaggcctggatcacattgctgag
aatattctgtcatatttggatgccaaatctttgtgttctgttgaactagtatgcaaggaa
tggtacagggtgacatctgatggtatgctatggaagaaactgattgagaggatggtccgt
actgactcattgtggaggggtttggcggagcgaagaggatggggacaatatatttttaga
aacaaaccacctgatgggataatgccaccaaattcattttacagagcactttatcccaaa
attatacaagatatagagacgatagaatcaaactggcgttgtggaaggcacagcttacaa
agaatccactgcaggagtgaaactagcaaaggtgtttattgtttacagtatgatgatcag
aagatagtgagtggtctacgagacaatacaatcaagatctgggacaaaaataccctagaa
tgcaagaggattctgaccggacacactgggtcagtcctttgtctccagtatgacgagcga
gtaatcatcactggatcttcagattccactgtcagagtgtgggatgtaaatactggtgag
atgctcaacaccctgatccatcattgtgaagcggtactgcacctgcgctttaataatgga
atgatggtgacgtgttctaaggatcgttccattgctgtttgggacatggcctccccaaca
gacattactttacgaagggttctggttggacacagagcagccgttaatgtggtagacttt
gatgacaaatacatcgtgtcagcatcaggggatagaactataaaggtatggaatacaagt
acctgtgagttcgttcgtaccttaaatggtcacaagcgaggcattgcatgtctacaatat
agagatagactagttgtcagtggttcatctgataatacaattaggttatgggacattgag
tgtggggcctgtttgcgggtgttggaaggccacgaggaactagtgagatgcattcgtttt
gataacaagaggatagtcagtggagcctatgatggaaaaattaaggtctgggatctgtta
gctgcgcttgatccccgtgctccctcaggaaccctctgcctgcgcactcttgtggaacat
tctggcagagtttttcgactccagtttgatgaatttcaaattgtcagcagctcacatgat
gatactatccttatctgggacttcctgaatgatccagctacgcaagcagaatcgaaccgc
tccccatccagaacatatacttacatatccagataa
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