Thamnophis sirtalis (common garter snake): 106549217
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Entry
106549217 CDS
T06107
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106549217 (NEFM)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
106549217 (NEFM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
Motif
Other DBs
NCBI-GeneID:
106549217
NCBI-ProteinID:
XP_013922280
UniProt:
A0A6I9YE47
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All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MDMKLSRSNEKEQLQGLNDRFAGYIEKVHSLEQQNKELEAELGALRQKQVGRSQLGVALE
HELRELRVALEQVNHEKAALQLDSDHLEEDIQRLKERFEDEARLHEDADAITRALRKDME
EASMVKVELDKKVQSLLDEVAFLRNNHEEEVADLLAQIQASHVSVERKDYLKTDLSAALK
EIRSQLECHSDQNMVQAEEWFKCRYAKLTEAAEHNKEAIRSAKEEISEYRRQLQAKSIEL
ESVRGTKESLERQLNDFEERHNQDLSTYHDTIQQLENELRGTKWEMARHLREYQDLLNVK
MALDIEIAAYRKLLEGEETRFSAFSGSITGPTFTHRQPSVTITTKIQKSKAEPPKLKVQH
KFVEEIIEETKVENEKSELDEALEAMAEELAAESLASEEKEEEVLEEEIIAMEKAEVAAA
APEEEGEEEEEEEEEEGAKSDEAQEGSEKEDEKSEKEEGEEEAEEEAAEGEAEEAEPEVA
EEPEGDIEEVIAPEKVEKVKTSPPKSPPKSPVTEESKEDEGGDQEGEAVEEEEEETEKAE
SPAKIASPEKPSTPDKGSPGKAGSPEKAGTPEKAGTPEKAASPEKAGTPEKAGTPEKAAS
PEKAGTPEKVGTPEKPGTLDKAASPEKAGTPDKAGTPEKAGTPETAGTPEKPGTLDKAAS
PEKAGTPEKAASPEKAGTPEKAASPEKAGTPEKAASPEKAGTPEKASPEKAGTPEKAASP
GKAETPEKAASPEKPRSPVKDVEEVISTTKATTVGAGKESKEKSSKESTKEDIAINGEVD
DKGEEDDSKQEEDKGVITNGLDVSPSEEKKEKSEEKVVVTKKVEKITSEGDGTTTYITKS
VTVTQKTEEHDDAVEEKLVSTKTVEKVTSSHAIVKEIKENGD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagttgtcccgctccaacgagaaggagcagctgcaggggctgaacgaccgc
ttcgccggctacattgagaaggtgcactcgctggagcagcagaacaaggagctggaagcc
gagctgggcgccctgcggcagaagcaggtgggccgctcgcaactgggcgtcgccctggag
cacgagctgcgcgagctccgcgttgccctggagcaggtcaaccacgagaaggcggcgctg
cagctcgactcggaccacctggaggaggacatccagcgcttgaaggagcgcttcgaggac
gaggcgcgcctccacgaggatgccgacgccatcacccgagccctgcggaaggacatggag
gaagcgtccatggtgaaggtcgagctggacaagaaggtgcagtctctgctggacgaggtg
gccttcctgcgcaacaaccatgaggaagaggtggccgatctgctggcccagatccaggcc
tcgcacgtctccgtcgagcgcaaggactacctgaagaccgacctctcggccgccctcaag
gagatccgctcccaactcgagtgccactccgaccagaacatggtccaggccgaggaatgg
ttcaagtgccgttacgccaagctcaccgaggctgccgagcacaacaaggaagccatccgc
tccgccaaggaagagatctccgagtaccggcggcagctccaggccaagagcatcgagttg
gagtccgtccgcggcacgaaggagtccctggagcgccagctgaatgactttgaggaacgc
cacaaccaggatctctccacttaccacgacacgatccaacagcttgaaaatgagctgaga
ggtacgaagtgggagatggcccgtcatttgagggaataccaagatctcctcaatgtcaag
atggctctcgatatcgaaattgctgcctacaggaaacttcttgagggtgaagaaacaaga
ttcagtgccttttctggaagcatcactgggccaacgttcacacataggcaaccttccgta
acaataactaccaaaatacagaaatcaaaagctgaaccaccaaaattaaaggtccaacac
aagtttgtagaagaaataattgaagagaccaaagtagagaatgagaaatctgaattggat
gaagctcttgaagccatggctgaagaactggctgcagaaagtctagcaagtgaagaaaag
gaggaggaagttctagaagaggaaattatagcaatggaaaaggctgaagttgcagctgca
gccccagaagaggaaggagaagaagaggaggaggaggaggaagaggaaggtgcgaaatct
gatgaggcacaagaaggatcagaaaaagaagatgaaaaaagtgaaaaggaagaaggtgag
gaagaagcagaagaagaggcagctgaaggagaagctgaggaagctgagcctgaagtagca
gaagagcctgaaggagatatagaagaagtcattgcaccagagaaggtagaaaaggtgaaa
acatctcctcctaaatcacctcccaaatcacctgtgacagaagaaagtaaagaagatgaa
gggggtgatcaagagggcgaggcagtagaagaggaagaagaagaaacagagaaagcagaa
tccccagcaaaaatagcatctcctgaaaaaccaagcactccagacaaaggatctccaggg
aaagcaggcagcccagaaaaggctgggactccagagaaagcaggaactccagagaaggca
gcctccccagagaaggcagggactccagaaaaagcaggaactccagagaaggcagcttct
ccagaaaaagcagggactccagagaaggttggaactccagaaaaaccagggactctagac
aaagcagcctctccagagaaagcagggactccagataaggcagggactccagaaaaagca
gggactccagagacagctggaactccagaaaaaccagggactctagacaaagcagcctct
ccagagaaagcagggactccagagaaggcagcctctccagaaaaagcagggactccagag
aaggcagcatctccagagaaggcagggactccagagaaggcagcatctccagagaaagca
gggactccagagaaggcttctccagagaaagcagggactccagagaaggcagcctctcca
gggaaggcagagactccagagaaggcagcttctcctgaaaagccaagatccccagtgaaa
gacgtggaagaggttatctccaccacaaaggcaaccacggttggtgcaggaaaagaatca
aaagaaaaaagttcaaaggaatcaactaaagaagacatagcaatcaatggggaggttgac
gataagggggaggaagatgactcaaagcaagaagaagataaaggtgtcatcaccaatggt
ctggatgtgagcccctctgaagagaagaaggagaagagcgaagagaaagttgtggtgacc
aaaaaagttgagaagatcaccagtgaaggtgacggaaccaccacctacatcaccaagtct
gtaaccgtcacccagaagacagaagaacatgatgatgccgtggaggagaaattggtgtcc
accaagacggtggagaaggtgacttcttcacacgccatagtcaaagaaatcaaggaaaac
ggtgactaa
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