Thamnophis sirtalis (common garter snake): 106549305
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Entry
106549305 CDS
T06107
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106549305 (RLIM)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106549305 (RLIM)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106549305 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
106549305
NCBI-ProteinID:
XP_013922387
UniProt:
A0A6I9YDZ5
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MMVRFVRLNVIHKHQGGRGWQAVQEPGLNFPPQRSWASRAPSSFPKHSTSGPIMLRPRGR
QSCHVFRWWWRRRDAAHLPELFSTFINMESSEANNKGNINQSEAQRRSQLDRLDREEAFY
HFVNNLSEEDYRLMRDNNLLGTPGEITEEELLRRLQQIKEGPPQQHTEDSRGSESTEDVS
NGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINVNRNNGNPSTE
TEGEPPVETPPGEDLENSQSDTETSRSASPPVVRPSSSPPVARQPDSEMSYPEELSEDIS
LQRGQRRSRSRSPEQRRTRARTDRSRSPLNPVSGSPRRIHHNTSSQTPDLPLVAEAEGSS
RTRQHMIIRQHATNSEAPAENTVLFSTSEARPVPQAVSSSETTGSAEPPAPGQRPPTIVL
DLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYVST
IRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDADPGGSAPAPNVETAE
PQPGGGSGNGHLIPEAPEAGLGEAYEGSPEGGPTTGPRREGRNTRGSVTFEESGSLPFLS
LAQFFLLNEEDDDQPRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSH
EYHVHCIDRWLSENSTCPICRRAVLASANRESVV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgcttcgtgcgcttgaacgtgatccacaagcaccagggagggagagggtgg
caggcagtgcaagagccgggactgaactttcccccacagcgcagctgggcctcaagggct
ccttcatctttcccaaaacattcgacttccggacccatcatgctgcgcccacgaggacgt
cagtcttgtcacgtgttccggtggtggtggaggaggagggatgcagcccatctgccagaa
ctattttctacttttatcaacatggaaagctcagaggctaataataaaggaaatatcaat
cagtcggaagctcagcgccggagtcagctggaccggttggaccgagaagaagctttctat
cactttgtaaataatctgagtgaagaagattacaggctgatgagagataacaacttacta
ggcactcctggtgaaattacggaagaagagctgctaagaaggctgcagcaaattaaggaa
ggcccaccccagcagcacactgaagacagcagaggttccgagtccacagaagatgtgtct
aatggcgattccataatagattggcttaattcagttcggcaaacggggaatacgacacga
agtgggcagagaggcaaccagtcgtggagagcagtaagccggactaatccaaacagtgga
gatttcagatttagtttggagataaacgtcaaccgcaataatgggaacccaagtacagaa
accgagggggagccacccgtagaaaccccccctggggaggacctagaaaacagccaaagt
gacactgagacttcgagatcagcctctcccccagttgtaaggccgagctcctctcctccc
gtggccaggcagcctgactcagaaatgagttatcccgaagaactgagtgaagacatctcg
cttcagagaggccagagaaggtcaagaagccgaagccctgaacaacgaagaacacgggca
aggactgatagaagtagatcccctcttaatccagtgagtggatctcctcgcaggatacat
cacaatacatcttctcaaaccccggatcttcccttggtcgctgaagcagaaggaagttct
agaacaaggcagcatatgatcatacgtcaacatgccacaaattctgaggcgcctgctgaa
aatactgttctcttttcgacctctgaagccaggcctgtccctcaggcagtgagttcttca
gaaacgactggcagtgcggagcccccagcccctggacagagacccccgaccatagtgctt
gacctgcaagtgagacgggttcgtccgggagaatacaggcagagagacagcatagccaac
cgaactcgatccaggtcccagacgccaaacaatacagtcacttatgaaagtgagcgaggg
ggatttagacgtaccttttcacgctcggaaagggcgggggtgagaacttatgttagcacc
attaggattcccattcgcagaatcctgaacacaggcctgagcgagaccacctcagttgcc
attcaaaccatgttaagacaaatcatgactggctttggtgagctcagttacttcatgtac
agcgatagcgacgccgatcccgggggctcggcaccagccccgaatgtggagacggcagag
ccccagcccggagggggcagtggaaatggccacttgatccctgaagctcctgaggctgga
ttgggagaggcctatgaaggcagccctgaagggggccccacaaccggcccgagacgggag
gggcggaacacaaggggctccgttacttttgaagaaagtggttccttgccattccttagc
ttggcccagtttttcctgctcaatgaagaagacgatgaccagcccagaggactcaccaaa
gaacaaattgacaacctcgccatgaggaattttggcgagagcgacgctctgaaaacctgt
agtgtttgtatcaccgaatacaccgaggggaataagcttagaaaactaccttgctcccac
gagtatcacgtgcactgcatagatcgctggctatctgaaaattccacttgcccaatttgc
cgccgagccgtcctggcttcggctaaccgggagagtgttgtctaa
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