Thamnophis sirtalis (common garter snake): 106549345
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Entry
106549345 CDS
T06107
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106549345 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106549345 (GTF2E1)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
106549345 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
106549345 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
106549345
NCBI-ProteinID:
XP_013922442
UniProt:
A0A6I9YE44
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MTDPDILTEVPASLKRLAKYVVRGFYGTEHSLTLDILIRNTCVKEEDMLELLKFDRKQLR
AILNTLKGDKFIKCRMRVETAPDGKTTRHNFYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPICCSTFTDLEANQLFEPNTGIFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDINLAYELLEPEPMEILALKQSKERAANALGNSNLPSGQHREAWT
TKGPSYGDMYTQNVIINMEDQEDAHQPANEGKLPRERPVWLRESTVKGAYDPNEVTEGGQ
DINVLHEDEEGQAALDNNEEVMRALLIHEKKTSSVSTAAMGGIAPLSATNASDSESETSE
SDEDSLPCAATAPTTLYGLADDNDEDEFEVVTEDPIVMVAGHPFSYSQVNQRPELVSQMT
VEEKEQYIAMGQRMFEDMFD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccagacattctcacggaggtcccagcttctctgaaacgccttgctaagtat
gtagtacgtggtttttatggcactgaacattctttgactctggacattctaattcgaaac
acatgtgtaaaggaggaagacatgttggagcttctgaagtttgatcggaagcagctgcga
gcaattctcaacactcttaaaggtgacaagtttatcaaatgcagaatgagagtggagact
gctccggatgggaagaccaccaggcacaatttctactttattaattatcgtctactggtc
aatgtggtgaagtataagttggatcatatgagaagaagaattgagacagatgaaagagac
tccactaaccgagcctctttcaggtgtcctatttgttgcagtaccttcacagatttagag
gcaaatcaattgtttgaacctaatacaggaatatttcgctgcacattttgtgagactgaa
gtggaagaagatgaatctgcaatgcctaaaaaggatgcaaggacacttgtagcacgattc
aatgaacaaatagaacctatttatgcattgcttcgtgagactgaggatattaatttagct
tatgaattacttgagcctgagcctatggagattcttgcattgaagcagagcaaagaacga
gctgctaatgcattgggaaacagtaatttaccaagtgggcagcacagagaagcctggaca
acaaagggtccttcttatggggacatgtacactcagaatgtaattattaacatggaagat
caagaagatgcacatcagccagcaaatgaagggaagctacccagagagagaccagtctgg
ctgcgggaaagcacagtgaagggtgcttatgatcctaatgaggtcactgaaggtggtcaa
gacataaatgtgttacatgaagatgaagagggacaggcagcactagataataatgaagag
gtaatgcgtgctctgctcatccatgaaaagaaaacctcctctgtctctacggctgctatg
ggagggattgctcctttatctgccacaaatgccagtgattccgagagtgagaccagtgaa
tctgatgaggactcccttccttgtgcagccactgctcccacaactctctatgggctggca
gatgacaatgatgaggatgagtttgaggtagtgactgaagaccccattgttatggtggca
ggacatcccttttcttacagccaagtaaaccagcggccggagcttgtgtcccagatgact
gtggaagagaaagagcaatatatagctatgggccagcgtatgtttgaggatatgtttgat
taa
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