Thamnophis sirtalis (common garter snake): 106549454
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Entry
106549454 CDS
T06107
Name
(RefSeq) tetratricopeptide repeat protein 30A-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106549454
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
106549454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
ANAPC3
TPR_12
TPR_1
TPR_CcmH_CycH
TPR_7
TPR_14
TPR_6
TPR_9
Ribosomal_S16
TPR_8
FANCI_S4
DUF285
Motif
Other DBs
NCBI-GeneID:
106549454
NCBI-ProteinID:
XP_013922586
UniProt:
A0A6I9YEJ4
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MASIADGEFTAAIYGLIRAGRFAEAVGILSSELQRSCRSRAGLSLLGYCYYQLQDFAAAA
ECYEQLGILHPELHEYRLYHAQALYKAGLYGEALRAAVPLLDVAPFQSRALRLQAAAHYA
QGDLSSAKALVELQLAAATESSPGAPEDPSELPDAEVNMGCLLYREGQHEEACGKFASAM
QVLGYCPELSYNMALCCYAAKQYAPALKHIADIIERGMQQHPELSVGTNTEGLDVRSVGN
TLLLHRTALVEAFNLKAAIEYQLCNLQAAQEALTDMPPRSEEELDPVTLHNQALMNMDRR
ATEGFEKLQFLLQQNPCPPETFGNLLLLYCKYQYYDLAADVLAENAHLTYKLLTPYLYNY
LDAMITCQTAPDEAFHKLDELAGALTEQLRKLTKEVQESRKNRDDDALRKAVNEYDETLE
KYVPVFMAQAKIYWDMENYPMLEKMFHKSVDFCKDHEVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKHYDNILQVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYHEPEKKIY
HLCIVNLVIGTLYCAKGNFDFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLLENMCKHV
IMVRDSVIQECIQFLEHCEVYGRTIPAVIEQPLEEEKMHSGKNTVTYEARQLRALMYEVI
GWNK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcctctatcgccgacggggaattcacggcggctatttacgggctgatccgagccggc
cgcttcgcagaggcggtggggatcttaagtagcgagttgcagagaagttgccggtcacgg
gccggcctgtcgctgctcggctactgctactaccagctgcaggatttcgcggcggcggcc
gagtgctacgagcagctggggatcctgcacccggagctccacgagtaccggctgtatcac
gcgcaggcgctctacaaggccgggctctatggcgaggccctgcgtgccgccgtcccgctg
ctcgatgtggcgcccttccagagccgagccctgcgcctccaggcggcggcccactacgcc
cagggcgacctctccagcgccaaggccctggtggagttgcagctggcagccgccaccgaa
agcagccccggcgcccccgaagacccttccgagctgcccgacgcggaggtgaacatgggc
tgcctgctctaccgcgaagggcagcacgaggaagcctgtggcaagttcgcctctgccatg
caggtgttgggctactgtcctgaactgtcctacaacatggccctgtgctgctacgctgcc
aagcaatacgcccctgctctgaagcacattgcagatatcattgagcggggcatgcagcag
cacccggagctgagcgtgggcaccaatacggaaggcctcgacgtccgcagcgtgggcaat
acgttgctcttgcaccggacggccctggtagaggccttcaatctcaaagccgccattgag
taccagctgtgcaacctgcaggcggctcaggaggccctcacggatatgccccctcggtct
gaggaggagctggacccggtcactttgcacaaccaggctctgatgaacatggacaggaga
gccacagaaggctttgagaaacttcagttccttctgcagcagaacccttgcccgccagag
acatttgggaatttgctgcttctgtactgcaagtatcagtactatgacctggctgcagat
gtgctggctgagaatgctcacttgacgtacaaacttctcactccttatttgtacaactac
ttggatgctatgatcacctgccaaacagcccccgatgaggcttttcataagcttgatgaa
ctggcaggggccctaacagaacagctcagaaaactgaccaaagaggtgcaggagtctagg
aaaaatcgagatgatgatgctctaaggaaagctgtgaatgaatatgatgagacgctggag
aaatatgttcctgtctttatggcccaggccaagatttattgggacatggagaactatccc
atgctggaaaaaatgttccataagtcagtagacttctgcaaggatcatgaagtatggaaa
ctgaatgtggctcatgtactattcatgcaagagaacaaatacaaagaggcaattggtttt
tatgagcccattgtgaaaaaacactatgacaacatccttcaagttagtgccattgttttg
gctaacctatgtgtttcttatattatgactagtcagaatgaagaagcagaggaactgatg
agaaaaattgaaaaagaagaggaacagctttcttaccatgaacctgagaaaaagatctac
catctctgtattgtcaatctagttattgggactctttactgtgccaaaggaaattttgat
tttggcatttctagagtgattaagagtttagaaccatataacaaaaagttgggcacggat
acttggtattatgccaaaagatgtttcttgtcactcttagaaaatatgtgtaagcatgtg
atcatggtgcgtgacagtgtcattcaagaatgcatccagtttcttgagcactgtgaagtg
tatggccgaactatcccagcagtaatagaacaaccacttgaggaagagaagatgcacagt
gggaagaacacggttacttatgaagctaggcagctgagggcactgatgtatgaggttatt
gggtggaataagtag
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