Thamnophis sirtalis (common garter snake): 106549466
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Entry
106549466 CDS
T06107
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106549466 (CHAF1B)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106549466 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
CAF-1_p60_C
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
B-prop_COPA_B_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_ELP1_1st
Beta-prop_SCAP
Ge1_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106549466
NCBI-ProteinID:
XP_013922600
UniProt:
A0A6I9YEK6
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MKVITCEIAWHNKEPVYSLDFQHGTDGKINRLASAGVDTTVRIWKVEKGPDGKAIVEFLS
NLARHIKAVNVVRFAPSGEILASGGDDATILLWKLNDNKELEAVVFQDDESDNQLNKENW
TVIKTLRGHLEDVYDICWTPDGNYMASASVDNTAILWDVSKGQKVSIFNEHKSYVQGVTW
DPVGQYIATLSCDRILRVYNTQTKRVAFNVTKMSSGGGSEGEVKSYRMFHDDSMKSFFRR
LTFTPDGSLLLVPAGCVESGENVMNTTYVFSRKNLRRPIAHLPCPGKATLAVRCCPVYFE
LRSACNKEESSQKIGLTNLPYRLVFAVASEDSVLFYDTQQTFPFGYVSNIHYHTLSDISW
SSDGSFLAISSTDGYCSFVTFEEGELGIPLKNKPAINIKTPSTAEKKIKKGQSPSVVSPV
SKPVDGSLNKSGEPSTACQTPTNSKDLHCTPVAVKNISMSSSEDKKTVQASIHTTKVNQP
RRITLNTLQAWNKSPRRVALIPLKEATPDTSRNAIQHERPSPPEDQLQNPPSPKRLRMDE
TL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaattacttgtgaaattgcatggcacaacaaagagccagtgtacagcttagat
ttccaacatggaactgatggtaaaatcaatagactggcctcagctggagtagacacaact
gttcgtatatggaaagtagaaaaaggaccagatgggaaagcaattgtggaattcttgtcc
aatttagctcgccatatcaaagctgtgaatgttgtacgttttgctcccagtggtgaaatt
ctagcttctggtggtgacgatgcaacaattttgttatggaagttgaatgacaacaaggag
ttagaagcagttgtatttcaagatgatgagagtgataaccagctgaacaaggaaaactgg
acagtaatcaaaactttaagaggtcacctggaagatgtatatgacatttgctggactcct
gatggaaattatatggcatcagcctcagttgacaacacagctatattatgggatgtcagt
aaagggcaaaaggtttctatttttaatgaacacaaaagttatgtgcaaggagttacatgg
gaccctgtgggacagtatattgcgactcttagttgtgataggatactgagagtgtataac
acgcaaaccaagagagtggcattcaatgttactaaaatgtcatcaggaggaggatctgaa
ggagaggtgaaaagctatagaatgtttcatgatgacagcatgaagtcctttttccggaga
ctgactttcactcctgatggttctctacttcttgttcctgcaggctgtgtggaatcaggt
gaaaatgtaatgaacactacttatgtcttctccagaaaaaatctgagaagacccattgct
catctaccttgtcctgggaaggcaacattagctgttcgttgctgccctgtctactttgaa
ttgagatctgcatgtaacaaagaagaaagttcccaaaagattggtctaacaaatcttcct
tatcggttggtttttgctgttgcttcagaggattctgtgctcttctatgatacacagcaa
acttttccttttggttatgtatctaacatacattaccatactctcagtgacatttcatgg
tccagtgatggatcatttcttgctatttcttctacggatggatattgctcttttgtcaca
tttgaagaaggtgaacttggaatcccactgaaaaataagccagccattaatatcaaaaca
cctagcacagcagaaaagaaaattaaaaagggtcagtcaccaagtgtcgtctctccagtt
tcaaaaccagtggatggcagtcttaataagtctggagaaccatcaactgcatgccagact
ccaaccaatagtaaagacttgcactgcacacctgttgcagttaaaaacatctccatgtca
tcttctgaagataaaaaaactgtgcaggcatcaattcacacaacaaaagtaaaccaaccc
aggaggattacattgaatactctacaagcatggaataagtcaccaaggagagttgcactg
attcctctaaaagaagctactccagatacttccagaaatgcaattcagcatgagagacca
tcaccacccgaagaccagttacaaaatccaccatcacctaagcgactaagaatggatgaa
actctgtaa
DBGET
integrated database retrieval system
