Thamnophis sirtalis (common garter snake): 106549498
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Entry
106549498 CDS
T06107
Symbol
LRRC8A
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106549498 (LRRC8A)
Ion channels [BR:
tsr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
106549498 (LRRC8A)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_R13L1-DRL21
LRR_LRWD1
LRR_At5g56370
LRR_9
Sp-CxC
BPD_transp_2
EFG_IV
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106549498
NCBI-ProteinID:
XP_013922642
UniProt:
A0A6I9YEP9
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All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MIPVTELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
TKDACNDSSREWTAANVDPGYYNASLGTPLDPGPTGIKYDLDRHQYNYVDAVCYENRLHW
FAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEE
SDPKPAFGKMNGSMEKKSSNISEDVEATAPMLQRTKSRIEQGIVDRTENGVLDKKEGEQA
KALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFILIICYTVYYVNNITFDIDCKVDIE
SLTGYRMYRCAHPLATLFKILASFYISLVVLYGLICMYTLWWMLRRSLKKYSFESIREES
SYSDIPDVKNDFAFMLHLIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRI
TKNSQDKLELHLFMLSGIPDTVFDLLELEVLKLELIPDVTIPPSIAQLTSLKELWLYHTA
AKIEAPALAFLRENLKSLHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAENNRYIVIDGL
RELKRLKVLRLKSNLTKLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMVNLTELELIR
CDLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNQIAYIPVQIGN
LTNLERLYLNRNKIEKVPTQLFFCRKLRYLDLSHNLLICLPAEIGALQNLQNLAVTANRI
EGLPAELFQCRKIRTLHLGNNVLQSLPSRVGELANLSQIELRGNRLECLPVELGDCPLLK
RSGLVVEEDLFNTLPLEVKERLWRADKEQA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtcacggaattgcgctactttgcggacacccagccggcgtaccgcatcctg
aagccctggtgggacgtctttacggactacatctccatcgtgatgctaatgatcgccgta
tttggcgggaccctccaggtcacccaggacaaaatgatctgcttgccttgcaaatgggtc
accaaagacgcttgcaacgattcttcccgcgaatggacggctgcaaacgtggaccccggc
tactacaacgcttccctggggacgcccctggaccctggtcccaccgggatcaaatacgac
ctcgaccgccatcaatataactacgtggacgccgtgtgttacgaaaaccgccttcactgg
tttgccaagtacttcccctacctcgtcttgctgcacaccctcatcttcctggcctgcagc
aacttctggttcaagttccccaggactagctccaaactggagcacttcgtctccatcctc
ctgaagtgcttcgactctccgtggaccacccgggccctgtccgagacggtggtggaggag
agcgaccccaagccggccttcgggaagatgaacggctcgatggagaagaagtcctccaac
atcagcgaagacgtggaggccaccgcccccatgctgcagaggaccaagtctcggattgag
caaggcatcgtggaccgcacggagaacggggtcctggacaagaaggaaggggagcaggcc
aaggctctcttcgagaaggtcaagaagttccggactcacgtggaggaaggagacatcgtc
tatcgcctctacatgaggcaaaccatcatcaaggtcatcaagttcatcctcatcatttgc
tacacggtctactacgtcaacaacatcaccttcgacatcgattgcaaagtggacattgag
agcctgacgggctaccgcatgtaccgctgcgctcaccccctggccaccctcttcaagatc
ttggcgtccttctacatcagcctggtggtcctctacggcctgatctgcatgtacaccctg
tggtggatgctccggaggtccctcaagaagtactccttcgagtccatccgagaggagagc
agctacagcgacatccccgacgtcaagaacgacttcgccttcatgctccacctgatcgac
cagtacgaccctctctactccaagcgcttcgccgtcttcctctcggaggtgagcgaaaac
aagctccggcagctgaacctcaacaacgagtggacgctggagaagctgcgccagaggatc
accaagaactcccaggacaagctggagctgcacctcttcatgctcagcggcattcccgac
acggtctttgacctgcttgagctggaggtcttgaaactggagctcatccccgacgtcacc
atcccgcccagcatcgcccagctcaccagcctgaaggagctctggctgtaccacacggcg
gccaaaatcgaggccccggctctggccttcttgagggagaacctgaaatccttacacatc
aagttcacggacattaaggagattcccttgtggatttacagcttgaagaccctggaagag
cttcatctgacggggaacctgagcgccgagaacaaccgctacatcgtgatcgacggcctg
cgggagctgaagaggctgaaggtcctgaggctgaagagcaacctgaccaagctgccccag
gtggtgacggacgtgggcgtccacctgcagaagctctccatcaacaacgaaggcaccaag
ctcatggtcctcaacagcctgaagaagatggtcaacctgacggagctggagctcatccgc
tgcgacctggagcgcatccctcactccatcttcagcctccacaacctgcaggagatcgac
ctcaaggacaacaacctcaagaccatcgaggagatcatcagcttccagcacctccaccgc
ctcacctgccttaagctctggtacaaccaaattgcctacatccccgtgcagatcggcaac
ctgaccaacctggagcgcctctacctgaaccgcaacaagatcgagaaggtgcccacccag
ctcttcttctgccggaagctccgctacctggatctcagccacaacctcttgatttgcctg
ccggcggaaatcggggcgctgcagaacctgcagaacctcgcggtgacggccaacaggatc
gagggtctccctgccgagctgttccagtgccggaagattcggactttgcacctgggcaac
aatgtcctgcagtccctgccctcccgggtgggcgagctggccaacctgtctcagatcgaa
ctgcggggcaaccgcctggagtgccttccggtggagctgggcgactgtcccttgctgaag
cgcagcgggctggtggtggaggaggacctcttcaacaccctccccttggaggtcaaggag
aggctttggagggcggacaaggagcaagcttga
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