Thamnophis sirtalis (common garter snake): 106549594
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Entry
106549594 CDS
T06107
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106549594 (SSRP1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106549594 (SSRP1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
106549594 (SSRP1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
106549594 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
106549594
NCBI-ProteinID:
XP_013922764
UniProt:
A0A6I9YFH6
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLNRQGVIFKNSKTGKVDNIQASDLAEGVWRRVALGH
GLKLLTKSGHIYKYDGFRETEFDKLSDFFKTHFHLDLAEKDLCVKGWNWGTVKFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEDEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKNVTYDEYDGSDDDSHDAYLERMKEEGKIREEHANDSSEDSGEETD
ESFNPVEEEEDVAEEFDSNASASSSSNEGDSDEEEKKPAKKAKIVKERKPRKKQSEGKKG
KDPNAPKRPLSAYMLWLNANRDKIRSECPGMSVTDVSKKAGELWKGMSKEKKEEWDRKAE
EAKRDYEKAMKEYSEGGKVDSSKREKAKKKKPDKPGKGRTEKKIVTPLKSASKTPPKQLV
ESFKSKEFVSSDESSSGEEKKGDSDEEEIASTPPSSSESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacattggagttcaatgaaatatatcaagaagtgaagggatctatgaacgat
ggccgtctgcggctaaaccgccagggtgtgatttttaagaacagcaaaactgggaaagtt
gacaacatccaggcctcagatttggcagagggtgtctggaggcgagtagcattgggccac
ggcctcaagctgcttactaaaagtggccatatctacaagtacgatgggttcagagagacg
gagttcgacaaactttcagatttcttcaaaacacactttcatttagatcttgctgagaaa
gatctatgtgtaaaaggctggaattgggggacagtcaagtttggagggcaacttctctct
tttgatattggggagcaaccagtttttgaaatcccactcagtaacgtgtcccagtgcact
accggcaagaatgaggtgactctggagtttcatcagaatgacgatgctgaggtgtcccta
atggaagtccgcttctatgtgccacccactcaggaggatggtgtggatcctgtggaggca
tttgcccagaatgtgctatcaaaggcagatgtcatccaggctactggagatgctatctgt
atcttccgagaactgcagtgcttgactcctcgtggacgctatgatatccgtatctatcct
accttcctgcacctccatggcaaaacatttgattacaaaatcccatatactactgttctg
cgacttttcttgcttccccataaagatcagcgccagatgttttttgtgatcagcttagac
cctcctataaagcaagggcaaacccgctatcacttccttattctattgttctcaaaggat
gaggatatctccttgaccctcaacatgaatgaggatgaagtcgagaagcgctttgaagga
cggctcaccaaaaatatgtctgggtctctgtatgagatggtcagccgtgtcatgaaagcc
cttgtgaaccgcaagataactgtaccaggcaactttcagggacattctggagcccagtgc
atcacgtgttcctacaaggctagttcgggcctcttgtatcctttggaacgtggcttcatc
tatgtgcacaagccacctgttcacatccgctttgatgagattgcttttgtcaactttgct
cgtgggacgacaacaacccgttcctttgactttgagatagaaaccaagcaagggacacag
tatactttcagcagcatagagagagaagaatatggcaaactctttgactttgtgaatgcg
aagaaattgaacatcaagaatcggggacttaaggagggcatgaagaatgtgacctacgat
gaatatgatggttctgatgatgactcccatgatgcctacttggagcggatgaaagaggag
ggcaagattcgtgaggaacatgcaaatgacagcagtgaggactccggagaggaaacggat
gagtcgttcaatccagtagaggaggaggaagatgtggcagaagagtttgatagcaatgcc
tctgctagttcttctagtaatgaaggggatagtgacgaggaggagaagaaacctgccaaa
aaagccaaaattgttaaagaacggaagccccgcaagaaacagtctgagggtaaaaaaggg
aaagaccccaatgccccaaagagacctttatctgcgtatatgctctggctcaatgctaat
cgtgacaagatcagatcagaatgtcctggcatgagtgtcactgacgtgtctaagaaagct
ggggaactgtggaaaggaatgtcaaaagagaagaaagaggaatgggaccgcaaagcagaa
gaggccaagagggattatgagaaggccatgaaggaatacagtgagggaggcaaagtggac
agttctaagagagaaaaagccaaaaagaaaaagccagataaaccaggaaaagggagaacg
gagaagaagatagtgacacctttaaaatctgctagcaagactcctcctaaacagttagtc
gagagcttcaagagcaaggaatttgtatccagtgatgaaagttcctcaggcgaagaaaag
aagggggactctgatgaggaggagatagccagcacgccacctagttcatcagagtctggc
tctgattag
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