Thamnophis sirtalis (common garter snake): 106549617
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Entry
106549617 CDS
T06107
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106549617 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106549617 (RUNX1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
106549617 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
DUF3037
Motif
Other DBs
NCBI-GeneID:
106549617
NCBI-ProteinID:
XP_013922795
UniProt:
A0A6I9YFV1
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MRIPVDTSTSRRFTPPSTTLSPGKMSDALPLVGQENGSSALVGKLRNADRSMVDVLADHP
GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRN
ATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRH
RQKLDEQTKTGSLSFSERLSELEQLRRTAIRVSPHHPAPAPNPRASLNHTTAFNPQPQSQ
IQDTRQLQPSPPWPYDPSYQYLGSIATSSVHPATPISPGRASGMTSLSAELSSRLTSASD
LTAFSDPRVGIDRPFSAIPSISDPRMHYPGAFTYTPTPVSSGIGIGMSAMTTATRYHTYL
PPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMMTGGDRSPPRILPPCTNASTGST
LLNPNLPNQNDVVDTEGSHSNSPTNMGTTARLEEAVWRPY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagataccagcaccagccgccgcttcacgccgccctccaccactctg
agcccgggcaagatgagcgacgcgctgccgctggtcggccaagagaacggcagcagcgcc
ctggtggggaagctgagaaacgcagatcgcagcatggtggatgtcttagccgatcatccg
ggagaactggtccgcaccgacagccccaacttcctctgctctgtcctgccgacccattgg
aggtgcaacaagactctgccgatcgctttcaaggtggttgcattaggagatgtccctgat
gggactttggtcacagttatggctggaaatgatgaaaactactctgcagaactcagaaat
gctactgctgccatgaagaatcaagtagcaagattcaacgatctaagatttgtcggcaga
agtggaagagggaagagcttcacattgactatcacagtcttcacgaatcctccacaagta
gccacataccacagagctatcaagataacagtggatgggcctcgagaaccaagaagacat
cgtcagaaactagatgagcagacaaagaccggaagtttgtccttttcagagcgcctgagt
gaactggaacagttgcgtcgcacagctataagggttagcccacatcatccagccccagca
cctaacccaagagcttccttgaaccacacaactgcttttaatcctcagcctcagagtcag
attcaggatacaaggcaacttcagccatctcctccctggccttatgacccatcttaccaa
tacctgggatcaattgcaacttcttctgttcatccagctacaccaatttcacctggaagg
gctagtggaatgacctccctttctgcagagctttcaagccggctaacaagtgcttcagac
ctaacagcattcagtgatccaagagtaggaattgatcgtccattttctgccattccttcc
atttctgatcctcgtatgcactatcctggagcattcacctatactccaaccccagtcagc
tcagggataggaattggcatgtctgccatgaccaccgccaccagatatcacacataccta
ccacctccctatccaggttcttctcaggctcaaggtagcccatttcagaccagttctcct
tcgtatcatctctactatggaacatcagcaggatcttaccaattctccatgatgactggt
ggtgatcggtctcccccacgtattctgcctccttgcactaatgcttccaccggatctacg
ttactcaatcccaaccttccaaaccaaaatgatgttgtggacactgaaggcagtcatagc
aactcccccaccaatatgggaaccacagcaagattagaagaagcagtgtggcgaccatat
tga
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