Thamnophis sirtalis (common garter snake): 106549622
Help
Entry
106549622 CDS
T06107
Name
(RefSeq) interferon kappa-like
KO
K05441
interferon kappa
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04060
Cytokine-cytokine receptor interaction
tsr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106549622
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106549622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106549622
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Interferons
106549622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
SAM_1
IL28A
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
106549622
NCBI-ProteinID:
XP_013922799
UniProt:
A0A6I9YFM7
LinkDB
All DBs
Position
Unknown
AA seq
190 aa
AA seq
DB search
MPSKRTPVPMGLLCLVLLLAAPTWGSNCNLLKLHQRRLNRQSVELLRRVKGKFPAECLRK
IPVFSFPVKILGIREPREATKAVLEVLQGFLHILKDEHRWVAWKATLQKRFLPMLHAQIQ
RIQGCLGEGKPAPGRRKEEWMHKLQLKKYFRSIGNFLEENGLDSCTREFVRHEIQLDFIY
LDRLTERMEI
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaaaggactccggtgcccatggggctgctctgcctggtgctcctgctggct
gctcccacctggggatcaaactgcaaccttctgaaactgcaccagcgaagactgaaccgg
cagagcgtggagcttctgaggagggtgaaggggaagtttccggcggagtgcctgcggaag
ataccggtgttcagtttccccgtaaaaatcctcgggatacgagagccgcgggaggccact
aaagccgtcctggaggtgcttcaggggttcctgcatatcctcaaagatgagcaccggtgg
gtcgcctggaaggccaccttgcaaaaaaggttcctccccatgttgcatgcgcagattcag
aggatccaaggatgcctcggagaagggaaacccgcgccaggaagaaggaaggaggaatgg
atgcacaaactgcaactgaagaagtatttccgcagcatcgggaattttctggaagagaat
ggactggacagctgcacccgggagtttgtcaggcatgaaatccagctggacttcatctat
ctggacaggctgaccgagagaatggagatctga
DBGET
integrated database retrieval system
