Thamnophis sirtalis (common garter snake): 106549769
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Entry
106549769 CDS
T06107
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106549769 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106549769 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106549769 (SHH)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C46: hedgehog family
106549769 (SHH)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Morphogens
106549769 (SHH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
106549769
NCBI-ProteinID:
XP_013922981
UniProt:
A0A6I9YFL7
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MLLLRRTGLLPLCLGALFLSAGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSAWVNLEGGGTKLVKDLRPGDRVLAADVHGQLFYSEFL
AFLDREDPPVHKLFYVIETQTPHARLLLTAAHLLFVAPPHNHSHSQPQPIFASRVQPGQH
VYVLAQGGQTLLQAAVHRVSLKEEASGAYAPLTAQGTILINQVLASCYAVIEEHSWAHWA
FAPFRIAHTALAVLNPEGLSSPLLFPAAVPEEGSSLAGVHWYSRLLYYIGRWILGSEMMH
PLGMAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttctgagaagaactgggctcctcccgctgtgcctaggcgcgcttttcctctcc
gccgggctggcttgcgggccgggccggggtttcggcaagaggaggcacccgaagaaactg
acccctttagcctacaagcagttcatccccaacgtggccgagaagacgctgggcgccagc
ggcagatacgaggggaagatcactcggaactcggagcgctttaaagagctgacccccaat
tataatccggacattatttttaaggacgaggagaacacgggagccgaccggctgatgacc
cagcgatgcaaggacaagctgaacgcgctggccatctccgtcatgaaccagtggccgggc
gtcaagctgcgcgtcacggagggctgggacgaggacggccaccactccgaggagtcgctg
cactacgagggccgcgcagtggacatcaccacctcggatcgggaccgcagcaagtacggc
atgctggctcgcctggccgtcgaggccggcttcgactgggtctactacgagtccaaggcg
cacatccactgctccgtcaaggccgaaaactcggtggctgccaaatcgggtggctgcttc
cctggttctgcctgggtgaacctggaaggaggaggcacaaagctggtgaaagaccttcgt
ccaggtgaccgagttctggcggcagatgtgcacggacagctgttctacagtgaattccta
gccttcttggaccgagaggaccctcctgtccacaaactcttctacgtgattgagacccaa
acaccccacgcccgcctcttactcaccgctgcccacctgctatttgtggccccaccacac
aatcattcccactcccaaccccagcctatcttcgctagccgtgtgcagcctggacaacat
gtctatgtgctggcccaagggggtcagaccctgttgcaagcggcagtgcaccgtgtgtcc
ctgaaggaggaggcctcgggagcttatgccccactcaccgctcagggcaccattctcatc
aaccaggtgctggcttcctgttatgctgtcattgaggagcacagctgggctcattgggca
tttgcgcctttccgcatagctcacacagccttggcagtgctgaatcctgagggtctctcc
tcccctctcctttttccagctgctgtaccagaagagggttcctcattggctggagtccac
tggtactcccgcctcctctactacattggccgctggattttgggttctgaaatgatgcac
ccattgggcatggccagctga
DBGET
integrated database retrieval system
