Thamnophis sirtalis (common garter snake): 106549793
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Entry
106549793 CDS
T06107
Name
(RefSeq) thrombospondin-4-like
KO
K04659
thrombospondin 2/3/4/5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106549793
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106549793
09144 Cellular community - eukaryotes
04510 Focal adhesion
106549793
09142 Cell motility
04820 Cytoskeleton in muscle cells
106549793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106549793
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106549793
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106549793
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Opsonins
106549793
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106549793
Exosomal proteins of colorectal cancer cells
106549793
Exosomal proteins of bladder cancer cells
106549793
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106549793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
COMP
EGF_CA
EGF_3
TSP_C
cEGF
EGF
DUF7630
EGF_LMN_ATRN
DUF1482
Motif
Other DBs
NCBI-GeneID:
106549793
NCBI-ProteinID:
XP_013923011
UniProt:
A0A6I9YFP6
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MFSKQALDEALQDLNKQISEDERLSSNPVVKIIYGDPAVFLSHLPKDSAIHSSRIWSFKK
RISVEHLAHIVQQKGGKDVVPILQKFLQKIQDIIAASMKACQEFHYKPIFFMFIRDPMAS
VSLHKQAVSLRYLRNDGKLSAVVFPNVPLADGKRHTVLLRLSGVQHGNSKAELYVDCVQV
DSVQILPKIFSEVLQSSESIELRTLQKKSQETLDDLKLIVRGSLSQVETLQDCFLPQTEP
PVQYSGDVNRQLLSHMLQMNEVLVEVKDLLRQQVKETAFLRNTIAECQACGLGIGGFPTP
SPHPPKPKCEADTCFPGVHCTDTTDGYQCGPCPEGFTGDGIICTDIDECQYKPCFPGVQC
VNMAPGFRCEACPPGYIGQIIQGMGINFAKNNKQACLDIDECQRIANGGCVPNSKCINTM
GSYHCGACKPGFTGDQVRGCKAERSCRNRVLNPCSIHAHCSEIRQGDILCVCGIGWAGDG
FLCGKDVDIDGYPDEKLPCSADSCKKDNCMFVPNSGQEDADGDGVGDACDDDADGDGIPN
DQDNCVLTPNVNQKNSDQDIFGDVCDNCRMVLNNDQRDTDGDGKGDACDEDIDGDVALPF
VLQAILSAVNGDISSTLDGDGHQDSTDNCPTVINSSQLDTDKDGLGDECDDDDDDDGIPD
HVPPGPDNCRLVPNPGQEDENSDGIGDICESDYDQDTVIDQIDVCPENAEVTLTDFRAYQ
TVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAV
NT seq
2272 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaagcaggctttggatgaagcacttcaggacttgaataaacaaatcagtgaa
gatgaaagactttcttccaaccctgtagtgaaaattatttacggggaccctgcagtcttc
ctgtcccaccttcctaaggacagtgctatacattcctctcggatatggagtttcaagaag
agaatctcagtcgagcacctggctcatattgtccaacagaaaggtggcaaggatgttgtg
cccatcttgcagaaatttttgcaaaagattcaagatattatagcagcttctatgaaggcc
tgtcaggaattccattataaacccatatttttcatgtttataagggatcctatggcatca
gtctcattgcacaagcaggctgtttctctgagatatttgaggaacgatgggaaattaagt
gctgtggtcttccccaatgtgcctttggctgatggaaagcgccatacagtcctccttcgg
ttaagtggagtgcagcatggcaacagtaaagccgaactgtatgtggactgtgtgcaggtg
gattctgttcaaattttgcctaaaatcttttcggaggtgctgcaaagctcagaatccata
gaattacgaacactccagaagaaatcacaggagactttagatgacttgaagttgattgtg
agagggtccttgtcccaagtggaaactctacaagactgttttctcccacagacagagcca
ccagttcagtattcaggtgatgttaacaggcaattattaagtcacatgttgcaaatgaac
gaggtactagttgaagtgaaagatctcctcagacagcaggttaaggagacagcatttctg
aggaatactatagctgaatgccaggcatgtgggttgggaataggaggtttccccactcct
tccccacatcccccgaaacccaagtgtgaagccgatacttgtttcccgggggtacactgc
acagacacaacagatgggtaccagtgtggtccttgtcctgaaggcttcactggagatgga
attatttgcacagatattgatgagtgccaatataaaccatgcttcccaggagtgcaatgt
gtgaacatggctccaggtttcagatgtgaggcctgcccaccaggatatattgggcagatc
atccaaggaatgggaataaactttgccaaaaataacaaacaggcttgcttggacatagat
gaatgtcagcgtatagcaaatggaggttgtgtcccaaactccaagtgcataaacaccatg
ggttcttaccattgtggtgcttgcaagccaggatttactggagaccaagtcagaggatgc
aaggctgaacgaagctgtagaaatcgtgttctcaatccttgtagcatccatgcccattgt
tcagaaataagacaaggggacattttgtgtgtttgtggcattggctgggctggtgatggc
tttctgtgtggaaaagatgttgatattgatggctatccagatgaaaagcttccatgctcg
gctgacagctgcaaaaaggacaactgcatgtttgttccaaactctggacaagaagatgct
gatggagatggtgtgggagatgcctgtgatgatgatgcagatggggatggtattcctaat
gatcaggacaactgtgtcttgactcctaatgttaaccagaagaatagtgaccaagatatc
tttggtgacgtttgtgataactgtcgaatggtattaaacaatgaccagcgggacactgat
ggagacggcaaaggagatgcctgtgatgaagatatagacggagatgtggctcttcctttt
gtccttcaggccattctttctgctgtgaatggagatatatctagcactcttgatggggat
ggacaccaagacagcactgataactgccccacagtcattaacagctcccagcttgacact
gataaagatggtttgggggatgagtgtgatgacgatgacgatgatgatggaattcctgac
cacgtccctccagggcctgataattgccggctggttcctaatccaggacaggaagatgag
aacagtgatggaattggtgacatttgtgaatcggactatgatcaagatacagtgattgac
cagattgatgtttgccctgagaatgcagaggtcactctgactgatttcagagcatatcag
actgttgtcctggatccagaaggtgatgctcagattgatccaaactgggtggttttgaat
cagggtatggagattgtgcaaactatgaacagtgatcctggacttgctgtag
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integrated database retrieval system
