Thamnophis sirtalis (common garter snake): 106549824
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Entry
106549824 CDS
T06107
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106549824 (RABGAP1)
Membrane trafficking [BR:
tsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106549824 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
Motif
Other DBs
NCBI-GeneID:
106549824
NCBI-ProteinID:
XP_013923045
UniProt:
A0A6I9YGL8
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MLIVGNGSEQQLQKELEDILMDPPMEDPSNDREGEEGSPSQDGEGDELVLLEASASSTIN
PVSVTGPSKPEMRLPVKPSQGDSEDSSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEA
LRMMAILRSQGQTSVDVTLSVPNVSEGTVRLLEPPTNTEIANYPIYKILFCVRGHDGTPE
SDCFAFTESHYNSELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQVPLAAPVTPEMPDS
DIFTFSVSLEIKEDDGKGCFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCF
GLLLSPGKDVQSGDMHLLDLESMGKSSDGKSYIITGSWNTKSPHFQIVNEETPKELTVYI
YKRQLNSCTLRPSLLSRHLNLSVRPKPLSALVRSGVPEALRGEVWQLLAGCHNNDFLVEK
YRILITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQ
SFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYS
HFLEINLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKVSITIF
WPNPDLEHDLGQALNEVQASRKTWFNRTLSSIKTAEEKADALNKELLMTKQKLIDAEDEK
RRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQIANKAEIEKI
QQKVDDCEHCREFFNKEGRLKVASVAREGSDEDTDEEKEVLKNQLREMELELAQTKLQLV
EAECKIQDLEHDLGQALNEVQASRKTWFNRTLSSIKTVTGVQGKETC
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgtaggaaatgggagtgagcagcagctgcagaaggaactggaagacatccta
atggatccccccatggaggacccctccaatgaccgggagggggaggaagggagcccctcc
caggacggagaaggagacgagctggttctccttgaggcctccgcctcctccaccatcaac
cccgtgtccgtgacgggaccctccaagccagaaatgaggctcccggtgaagccatcccag
ggagattcggaggactccagccccttcaccccagtggccgacgaggacagcgtggtcttc
agcaaactcacttacttgggctgcgcctcagtcaacgccccccgaagcgaggtggaggcc
ctgaggatgatggccatcctgcggagccaaggccagacctctgtggacgtgacgctttct
gtgccaaatgtgtctgagggcaccgtgaggttgctggagcctccaacaaacaccgaaata
gccaactatcccatttacaagatcctgttctgtgtgcggggtcatgacgggactccggaa
agcgactgctttgctttcacggaaagccattacaactccgagctcttcagaattcacgtc
ttccgatgcgagatccaggaagctgtgagccggatcctgtacagttttgccaccgctttc
cgccgttctgccaagcaagtcccgctcgcggcccctgttactccagagatgccagacagc
gacatcttcaccttttcggtctccctggaaatcaaggaggacgatgggaaaggctgcttc
agtgccgttccaaaagacaaagacaggcagtgcttcaagttacggcaagggatcgacaag
aagatcgtcatctacgtgcaacagaccactaacaaagaattggccatcgagagatgtttt
ggcctccttctcagtcctgggaaagatgtgcagagcggagacatgcatttgctggatttg
gagtcgatggggaaaagctcagatgggaaatcgtacatcattaccgggagttggaacacc
aagtctccgcacttccaaatagtgaacgaggaaacgcccaaagagctaacagtgtatata
tataaacggcaactgaactcatgcaccctccgtccctccctcctttccaggcacttgaac
ttgagtgtgcggcccaaacccttgtctgcgttggtgaggagcggcgttcccgaagccctc
cggggagaggtgtggcagcttctggcaggatgtcacaacaacgattttctggtggagaaa
taccggatcctcattaccaaggagtctccccaggacagtgccatcacccgggacatcaac
cggaccttccctgcccatgactacttcaaagacaccggaggagatgggcaggactcgctg
tacaaaatatgcaaggcttactctgtctacgacgaggagattggctactgtcaagggcag
tctttcctggcagccgtgttactcctacacatgcctgaagaacaggccttcagcgttctg
gtcaaaatcatgttcgactacggactcagggagcttttcaaacagaattttgaggacctg
cactgcaagttttatcagctggaacgtctcatgcaggagtacatccccgatctctacagc
cacttcctggagatcaacttagaagctcacatgtatgcatcccagtggttcctcaccctt
ttcaccgcaaagttccctctctacatggtcttccacatcatcgacctgctcctgtgtgag
ggcatcagtgttatttttaacgtcgcacttggactgttaaaagtgagtattaccattttc
tggcccaacccggacctggagcacgacctgggacaggcgctgaacgaggtgcaggcctcg
cgcaaaacctggttcaaccgaacgctgagctctataaagacagcggaagaaaaagctgat
gcgctgaacaaggagctcttgatgaccaagcagaagctgatcgatgccgaggatgaaaaa
agaaggctggaggaggaatcagcgcagctgaaagaaatgtgccggagggaactggacaag
gctgagtcagagatcaagaagaacagctccatcattggggactacaagcagatttgttcc
caattgagcgagaggctggagaagcagcagatagccaataaagcggaaattgagaaaatc
cagcaaaaagtcgacgattgcgaacactgccgggagtttttcaacaaagaaggccgcttg
aaggtggccagtgtggccagggagggttccgacgaagacaccgacgaggagaaggaggtg
ctgaagaaccagttgcgagaaatggagctggaactggcccagaccaagttgcaactggtg
gaggctgaatgcaaaatccaggacctggagcacgacttgggacaggcgctgaacgaggtg
caggcctcgcgcaaaacctggttcaaccgaacgctgagctctataaagacagtgaccggc
gtccaaggcaaagagacgtgctga
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