Thamnophis sirtalis (common garter snake): 106549846
Help
Entry
106549846 CDS
T06107
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106549846 (NOP2)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106549846 (NOP2)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106549846 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
MACPF_D3
Motif
Other DBs
NCBI-GeneID:
106549846
NCBI-ProteinID:
XP_013923074
UniProt:
A0A6I9YGE7
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MGRKLDPTRQVKRGPGRKARKQRGAEEELARFLPPALDDNAAKLSSHARRRAAKRRVKSE
QLQKNKNAPNHQNVTAKKKTLKNAKKGKSSPEDNPTNGSTDAAMQLPSPALRKKRSRTEE
SEEDKEESMAFSDEDDLSEDEIRDDYGVASSSDEELLPIERAARKQKMEGQDISEDDSED
ETPPSSQRIEQKEEKDADLQLNMEAEECFVLPSGQEIEKETAQPPDLQLIHQRIKDNMEV
LQNFSSKREEGRSRQEYLSLLHQDLAAYYSYSDFLIGKMTELFPLSELVEFLEANEVSRP
VTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQ
GASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGVILANDSNSERLHSVVGNL
HRLGVTNTVVSNCDGRQFPKVLGGFDRVLLDAPCSGTGVISKDPTVKTNKDEKDILRCAH
LQKELILSAIDSVNAASETGGYVVYCTCSVMVEENEWVVDYALKKRNVRLVPTGLDFGKE
GFTRFRERRFHPSLKSTRRFYPHTHNMDGFFVAKLKKFSNAIPKPQKDEVPSEELTMQTV
KNGSAPTEPPPKKKKDAESKASPQQASKQELSAAVAARKEAKGELKASKKKKALAASKQS
NFQKKSRLLNAAWPSPGGLRAKSTPRKKGRVQRNPQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggacccgacccggcaggtaaagcgggggccaggtcggaaggcccgc
aagcagcgtggggcggaggaggagctcgcccgctttttgccgcccgcacttgatgacaat
gcagccaaactttccagtcatgcccgacgaagagctgcaaaaagacgggttaaatctgag
caactgcagaagaacaagaatgcccccaatcaccaaaatgtgacagctaaaaagaaaaca
ctcaagaatgcaaagaaggggaaaagttccccagaggacaacccaactaacggcagcact
gatgcggccatgcagctcccttcccctgccttaaggaagaaaaggtccaggaccgaagag
agtgaagaagacaaagaagagagcatggctttcagtgatgaagatgatctaagtgaggat
gagattagggatgactatggagttgcttcctctagtgatgaagagcttctgcccatagaa
cgagctgctcgaaaacaaaagatggaagggcaggacatcagtgaggatgacagtgaggat
gagacaccaccatccagccagaggatagagcaaaaggaagaaaaggatgcagacctgcag
ctcaacatggaggcagaggagtgcttcgtgcttcccagtgggcaggagatagagaaagaa
actgctcagcctcctgatctccaactcattcatcagcgtataaaagataacatggaggtg
cttcagaatttcagttcaaagcgagaggaaggacgctcaaggcaggaatatttatccctt
ctgcatcaggatcttgccgcctattactcttacagtgatttcttaattggaaagatgaca
gaactcttccctctgtctgagctggttgaattcttggaagccaatgaggtctctcgacca
gtgaccctccgcaccaatacactgaagacaagacgccgtgatttagcccaggccttgata
aatcgtggagtgaacttagaccctttaggaaagtggtcaaaaactgggcttgttgtttat
gactcctctgtacctataggtgccaccccagaatacttagctggacactacatgctgcaa
ggtgcttccagccttctccctgttatggctctggcccctcaggagaacgagcgcattctg
gacatgtgctgtgccccaggaggcaagaccagttacatagcccagctgatgaagaacaca
ggggtgatactagctaatgacagcaattcggagcgtttgcacagtgtggtgggaaacttg
caccgcttaggagtcacaaacactgttgtgagcaactgtgatgggcgccagtttcctaag
gtactgggtggatttgacagagtcctgcttgatgctccctgcagtggtactggtgttatt
tcaaaggaccccacagtcaaaactaataaggatgaaaaggacattttgcgctgtgctcac
ctacagaaggagttgatcctcagtgccattgactccgttaacgcagcctctgagaccggg
ggatacgttgtgtactgcacttgttcagtcatggtggaagagaacgagtgggtggtggat
tatgccctgaagaagcgcaacgtccgcttggtgccaacgggtctggactttggcaaagaa
ggatttacccggtttagggagcgtcgtttccatccgtccttgaaatccacgcgccgtttc
tatcctcacacccacaatatggatggtttttttgtggccaaattgaaaaaattttccaat
gccattcctaaacctcagaaagatgaagtgcccagtgaggagctaacaatgcaaacagta
aaaaatggatctgctccaactgaacctccacctaaaaagaaaaaagatgcagaaagtaaa
gccagtccgcagcaggcttcaaagcaagagctttcagctgcagtcgcagccaggaaggag
gctaaaggggagttgaaagctagtaaaaagaagaaagcgcttgctgcctccaaacaaagc
aactttcagaaaaagtccagactcttgaatgctgcttggccctctcctggaggactaagg
gctaagtcaactcccagaaaaaagggcagggttcaacgaaacccacagtag
DBGET
integrated database retrieval system
