Thamnophis sirtalis (common garter snake): 106549850
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Entry
106549850 CDS
T06107
Symbol
ZC3H12A
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106549850 (ZC3H12A)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106549850 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
UBA_9
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106549850
NCBI-ProteinID:
XP_013923080
UniProt:
A0A6I9YGR6
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MDLDRPPPSALRFSGWAEPPLPCARAVGREEPPESGYLSLCGCSLEGSGESGGGGDPWSA
PEQGRAERRQKVEFFRKLGYSSQEVLGALQKHGPEADTNTILGELVKHGAAPGEREREPA
PEAPEPPVPLPRARPAPNSPPTQPGPPEEQDGDHLRPIVIDGSNVAMSHGDKDSFSCRGI
QLAVTWFLDRGHKDVTVFVPSWRKEHSRSDVAITDQHILHDLEKKNILVFTPSRRVAGKR
VVCYDDRFIVKLAWESDGIVVSNDVYRDLQAERAEWKKFIEERLLMYSFVNDKFMPPDDP
LGRHGPSLDNFLRKTPAVPEHKRQQCPYGKKCTYGIKCKFYHPERPHQLQRSVADELRAN
AGLSPTRTAPATKEERRSWRPPHGEFWGSVPAESEKVPLQKALAEKTSSAPLIRHGDVPP
FFLGAHGIPARKSHGYRSLDQYQLPPRDSLAHVSQDHLDSGLGSLENQLSEMWPSPSASP
VKWAQQEPLGESSCRGQGPAYRVPPGPESRSYSQYRPQSFLPTPSEQVTPHSFPGYDVAS
SASLGPRRKYWSEPYHPGPAVRQDVSRAPCLAYKDSSHHWASPDSFAEERAKVHVKLCGI
FHPHLVETVMNRFPHLLEPQQLAAEILTYKTQHLGV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaccgaccgccgcccagcgccctgcgcttctccggctgggccgagcccccg
ctgccctgcgctcgcgccgtgggccgcgaagagcctccggaaagcggctacctgagtctc
tgcggctgcagcctggagggcagcggagaatccggcgggggaggcgacccctggagcgcc
cccgagcagggccgagcggagaggcggcagaaagttgagttcttccgcaagttgggctac
tcttcgcaggaggtgctgggcgccctgcagaagcacgggccggaggcggacaccaacacc
atcctgggggagctggtcaagcacggggcggcccccggcgagagggagagagagcccgcc
ccggaggcccccgagccgccggtgccgcttcccagagcgcggcctgcccccaacagcccc
ccgacccagccggggcctccggaggagcaggacggggatcatctgcggccgatcgtcatt
gatgggagcaacgtggccatgagtcatggagacaaagactccttctcctgccgaggcatc
cagctggctgtgacctggtttctggatcgaggacacaaggatgtcacggtcttcgtccca
tcttggagaaaagagcattcacgctctgatgtcgccattacagaccagcacatcctccat
gacctcgagaagaagaacatccttgtcttcactccttcccggcgagtggcaggcaagcga
gtggtctgctacgatgaccgcttcattgtgaagctagcctgggagtcggacggcattgtg
gtatccaacgatgtctaccgggacctgcaagcagaacgggcagagtggaagaagttcatt
gaagaacgcttgctgatgtattcctttgtcaatgacaagttcatgcctcccgatgacccc
ttggggcgccatggacccagcctggataacttcctgaggaagacgccagcagtgcccgag
cacaagaggcagcagtgcccatacggcaagaagtgcacctatggcatcaagtgtaagttc
taccaccctgagcggccgcaccaactgcagcgctccgttgccgatgagctccgggccaac
gccgggctctcccccaccaggactgcaccagccaccaaggaggagaggaggagctggagg
cccccccatggggagttctggggctctgtacctgcagagagtgagaaagtccccctgcag
aaggccttggctgagaagacgagctctgcccctctcattagacatggtgatgtgccaccc
ttcttcctcggtgcccatggcatcccagcccggaagagccacggttataggagtttagat
cagtaccagctgcctcccagggactcccttgcccatgtctctcaagaccaccttgactcg
ggccttggctcccttgagaatcagctctctgaaatgtggcccagcccctcggctagccct
gtcaagtgggcccagcaagagccacttggggagagcagctgcagggggcaggggcctgcc
tatcgggttcctcctggcccggaatccaggagctacagccagtaccggcctcagagcttc
ctgccaaccccatctgaacaggtcactcctcactcctttcctggctatgatgtggcctcc
agtgcttctctgggccctaggcgcaagtactggtccgagccatatcatccagggcctgca
gtgcgccaagacgtgtcgagagctccctgcctggcctacaaggactcctcacaccattgg
gcctccccagacagttttgcagaagagcgtgcaaaggtgcacgtcaagctttgtgggatc
ttccatcctcatctggtggagactgtcatgaaccgcttcccacacctcttggagccacag
cagctggctgctgaaatcctcacatacaagactcaacaccttggggtgtga
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