Thamnophis sirtalis (common garter snake): 106549942
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Entry
106549942 CDS
T06107
Name
(RefSeq) interferon-induced guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106549942
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SSDB
Ortholog
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GFIT
Motif
Pfam:
GBP_C
GBP
NCAP_ISAV_hel
DUF2252
Motif
Other DBs
NCBI-GeneID:
106549942
NCBI-ProteinID:
XP_013923177
UniProt:
A0A6I9YG73
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MELSAHIKGKASSRPEDTDDSSEFVRFFPNFVWTVRDFSLRLEHNDQPITEDDYLENALE
LKKEDSEKEQAFNLPRKCIRLFFPTRKCFVFYCPTRSRDLPYLETMMDNQLEPEFVEQAN
KFCNYIYWTSREKTLPGGHIVTGNLLANLVKIYVDTICSGKLPCPENAVSALSETENRLA
VEEAVAHYVKLMKQNVELPTETLQELLDIHKKCEEQALQKFMARAFKDDKRQFQHKLMKI
VNKKKEKYCRKNEQESSKICSALLNSLSENLEQNIKNGNYCRSGGHQEFVNDLQKVEKQY
LEEPKKGIMAGETLKKFLCSKENISKFILRNDESLQQKEAEIEDARMKAKAKELEGEIQK
QNEEMLKQKLESEKESYEMNLQKLKEKLEEERKQILEEQEKMIQSKLKEQKDFLEKGFEN
EAIQMNKKIEELISEKEEVEDENWLISGLGALKGFFTEKIIEPIVEWFEDLMDSD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtctgcacatatcaagggaaaggcttcctccagacctgaagatacagatgat
tcttctgaatttgttcgcttcttcccaaactttgtctggacggtgcgagatttctcactg
cggctggaacataatgatcaacccatcacagaggatgattatctcgaaaatgcgctggaa
ttaaaaaaagaggacagtgagaaggagcaggcgttcaatctgccccggaaatgcatccga
ctgttcttccccacccggaagtgcttcgtcttttattgccctactagaagtagggactta
ccctatctggaaacgatgatggataatcagctggagcctgaatttgtggaacaagcaaat
aagttctgcaattacatctattggacatctcgagaaaagactcttccaggcggacacatt
gtcacaggcaatttgttggcaaatttggtgaagatctacgtggatactatctgtagtggg
aaacttccctgcccggagaatgcagtctcagccttgtctgagactgagaaccgtttagct
gtggaggaagctgttgctcactatgtgaaactgatgaagcaaaacgtggagctacccact
gagactctccaggaacttctggacatacacaaaaaatgtgaggaacaagccctccagaag
ttcatggctcgtgctttcaaggatgataaacgtcagttccagcataaactcatgaaaatt
gtgaacaagaagaaggaaaagtactgcaggaaaaatgagcaggaatcttctaaaatctgt
tcagctttattgaactcactctctgagaacctggagcagaacatcaagaacggaaactac
tgccgatctggtggccaccaggaatttgtaaatgacctccagaaagtggagaaacaatac
ttggaggaacctaagaaaggaataatggcaggtgagaccctgaaaaaattcctctgtagc
aaggaaaacatcagcaaattcatccttcgaaatgatgaaagccttcaacagaaggaggcg
gaaatagaagatgcaaggatgaaagcaaaagcaaaagaattagagggtgagattcagaag
cagaatgaggaaatgttgaaacagaagcttgaaagcgagaaagagagttatgagatgaac
cttcagaagctaaaggagaaattggaggaagaaaggaagcagatcctggaagagcaggag
aaaatgatccaaagcaaactgaaggaacaaaaggatttcttggaaaagggtttcgagaac
gaagcaatccagatgaataagaagatcgaagaactcataagtgaaaaggaagaggtggaa
gatgaaaattggctaatctcaggtttaggagccctgaaaggatttttcactgaaaaaatt
attgagccaattgtagagtggtttgaagatctaatggacagtgactga
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