Thamnophis sirtalis (common garter snake): 106550024
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Entry
106550024 CDS
T06107
Symbol
LAMA2
Name
(RefSeq) laminin subunit alpha-2
KO
K05637
laminin, alpha 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106550024 (LAMA2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106550024 (LAMA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106550024 (LAMA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_I
Laminin_II
Laminin_EGF
Laminin_G_3
DUF948
cwf21
Motif
Other DBs
NCBI-GeneID:
106550024
NCBI-ProteinID:
XP_013923279
UniProt:
A0A6I9YH27
LinkDB
All DBs
Position
Unknown
AA seq
1638 aa
AA seq
DB search
DYRCTACPPGYEGQYCERCSPGYTGNPKIPGGSCQECECHPHGSLPVPCDPLTGQCVCKP
GSTGWKCAGCEPWHAREGIACVSCDDECTGVLLRDLDQLNQMTLSVNLSGPLYPPYKMLY
SFENTTHELKHLLSPQQTPERLINLAQKNLDTLVIEMDELLTRATKVTADGEQTGQDAKT
TNERAKSLGQLIKVTLQASEGVNDDALKLNETLGIPDKALDKSFQELQSEVDKMMAELRK
RKLEVQKAVAQDELESAEDLLKNMNKLFVEPKKKTEDLKNEVKEKLADYHDKIDDALNLL
REATNKIREADRLSAINQRNLTGVEKKKQAIENGRQETENTLKEGNDILGETNELANEIN
LAVENIDNIKNEMGPLSVELKGKIDNLSGDIKNKKLPEKVLQAEAHAAQLNDSSAILDGI
LDEAKNLSFNATIAFKAYSNIKDHIDEADAISKDAKARANEAIKLASGPEGSLKDAAKNA
LQKSFKVLNDANKQANDVKENEDNLKGMQNKLQVAGERNSALLKALNDTLEKLLAIPNDT
AAKVQAVKDKAKQANDTANEVLAKIRDLNQNLLGLKDRYRKVADDAAKTNAMLKDPTKNI
ADADDTVKNLGEEANRLMDKLKPIKQLQDNLGKNISHIKDLINQARKQANSIKVSVASGG
NCIRTYRPEIKKGLYNTVILNVKTTVPDNLLFYLGSNRYTDFLAIEMRKGKVDFLWDVGS
GVGRADYPDLTIDDGVWYRIEASRTGRNGTISVQALDGPKATIIPSIFSAISPPGYTILD
VDANAMLFVGGLTEKIKKSDAVRVTTFTGCMGETYLDSKPIGLWNFRDIEGECKGCAVSP
QVADGEGTVQFDGEGYATVSRPIRWNPNISMVMFKFKTFSSTSLLMYLATLDLKDFMSIE
LSDGHIKVSYDLGSGTASVVGDQSHNDGKWKSFTLSRILKEANISIVDIDSNNEEIIPAV
SPGKHFGLNLKADEPIYFGGLPSLRRNLSMKSRPEVNTKKYSGCLKDIEISRTPYNLLSS
PDYLGITRGCTLQNIYTVSFPKPGFVEMPPIPLEVGTEIHLSFSTKNESGIILFGTNEIP
VPPRRKRRQTGQVYYAVFLNGGRLEVHISTGVREPRKIVVKPESGEFHDGKEHSLWLERL
GGLFAIQVDEDRRQSQRLPTDQAISIKRLFVGGTPPEFHTLPIKSIPAFDGCIWNLVVNA
VPMDFAQSVAFENADIGQCPDSGQHHEKEDEDGTPETTSHPEPEKEERKASTTSPPPPPF
PPLPEHCAADVEPIALEGAMQFGLSRNSHIAVAFDDTKVKNKLTIELEIRTKAENGLLFY
MARINHADFATIQIKNGFPYFSYDLGHGNTSTMIPNKINDGQWHKIKIFRSKQQGVLSVD
GTTNRTTSPKKADILDVVGMLYVGGLPINYTTRRIGPVVYSIDGCMRNFRMSESPIDLNN
PTSIYNVGRCFVNPQEGTYFAGTGFAKTVGAYKVGLDLQVEFEFRTTRTNGVLLGISSQK
MDGLGIELVDENVMFHVDNGAGRFSAIYEPAITGSLCDGHWHRVVAHKMRHRLMLTVDDQ
HVEGISPNAASTSAETNDPVFVGGYPDGLKQFGLTTNIRFKGCIRSLKLIKGTAKPLEIN
FSKALEIKGVQPLSCPGN
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
gattaccgatgtacagcttgtccacctggatatgaaggacagtactgtgaaagatgttct
cctggatacaccgggaacccaaaaattcctggtggatcttgtcaagagtgtgagtgtcat
ccacatggttcactgcctgttccttgtgaccctctcactggacaatgtgtgtgcaagcct
ggatctactggctggaagtgtgcaggatgtgaaccctggcatgctcgtgaaggcatagca
tgtgtttcttgcgatgatgagtgcactggtgtccttcttcgtgacttggatcagttaaat
cagatgactctaagtgttaatcttagcggaccactttatccaccatataaaatgctttat
tcttttgaaaacacaacccacgaattaaagcatttattgtcacctcagcaaacaccagaa
agacttattaatttggcacagaagaatttagatactcttgtgatagaaatggatgaattg
ctgacaagggcgaccaaggtgacagcagatggggaacaaactggacaggatgctaagaca
actaatgagagagcgaagtcgcttggacagctcatcaaagtcaccctccaggcttcagaa
ggtgtaaatgatgatgctttaaaactgaacgagacacttgggatcccagacaaggcactt
gacaaaagctttcaagaattacaaagtgaagttgacaaaatgatggcagaacttaggaag
agaaaattggaagtgcaaaaggcagtagctcaagatgaattagagtcagcagaagacctc
ttgaagaacatgaacaagctatttgtagagccaaagaagaaaactgaggacctgaaaaat
gaagtcaaagagaaactagcagactaccatgataaaattgatgatgctctgaacctgttg
agagaagcaactaataaaattcgggaagcagacagactatcagcaatcaaccaaagaaac
ttgacaggagtagagaaaaagaagcaagctatagaaaatggacgacaggaaactgaaaat
actctaaaagaaggaaatgacatccttggtgaaactaatgaacttgcaaatgaaatcaat
ttggctgtggagaacatagacaatattaaaaatgaaatgggcccactttcagttgaactg
aagggtaaaatagataatctatctggagatatcaaaaataagaaacttccagaaaaggta
ctgcaggcagaagcccatgctgcccagctgaatgattcatctgctattttggatggaatc
cttgatgaagctaaaaacctctccttcaatgcaacaatagcttttaaggcctatagcaat
atcaaggaccatattgatgaagcagatgcaatttctaaagatgctaaagctcgtgccaac
gaagccataaaattggcatctggtccagaaggctcattaaaggatgctgccaagaatgct
ttacaaaaaagcttcaaggttcttaatgatgccaacaaacaggcaaatgatgttaaagaa
aatgaggataatctaaaaggaatgcagaataagttgcaagttgcaggggaaagaaactca
gctctcttgaaagctctgaatgacaccctggaaaagctattagcaattccaaatgataca
gcagccaaagtacaagcagttaaagacaaagctaagcaagctaatgatactgcaaatgag
gtactggctaaaatcagagatctcaatcaaaacctccttggattaaaagacagatacaga
aaagttgcagacgatgcagccaaaacaaacgctatgttgaaagatcctactaaaaatatt
gctgatgcagatgacactgttaaaaatctaggtgaagaagcaaatcggttgatggataaa
ttgaaaccaatcaaacaacttcaagataacctggggaagaacatctctcacattaaggat
ctgataaatcaagccaggaagcaagccaattctattaaagtatctgtggcttcaggagga
aactgtattcgaacatacagaccagaaattaaaaaaggattgtacaacactgttattctc
aacgtaaagacaactgttcctgataatctacttttttatcttggaagtaatagatatact
gacttcttggccatagaaatgcgtaaaggaaaagtggatttcttatgggacgtgggatct
ggggttgggcgtgcagactatccggatctcacaattgatgacggagtttggtaccgaatt
gaagcatcaaggactggaagaaatggcacaatttcagtacaggcactagatggtcccaag
gccaccatcattccaagcattttcagtgcaatttctccacctggttacacaattttagat
gtggatgcaaatgccatgctatttgttggaggtttaactgagaaaataaagaaatctgac
gctgtgagagtcactacattcacaggatgcatgggagaaacctatttagacagcaaacca
ataggactgtggaatttcagagacattgaaggagagtgtaaaggctgtgctgtcagcccc
caggtggcagatggtgagggaactgttcagtttgatggagaaggttatgctaccgtgagc
cgtcccataagatggaaccccaatatctccatggtcatgttcaaattcaagacattttct
tctacttctctcctgatgtatcttgctactctagacctgaaggatttcatgagcatagaa
ctcagtgatgggcatattaaagtcagctatgatctaggctcaggaacagcttcagttgtc
ggtgaccagagccacaatgatgggaaatggaaatcattcaccttgtcaagaattctcaaa
gaagctaatatatcaattgtagacatagattctaacaatgaggaaatcataccggcagtt
tctccaggaaagcattttggtctcaatctgaaagctgatgagcccatttattttggtgga
ttgccatcgctgagaagaaacctaagtatgaaatcaagaccagaagtaaacacaaagaaa
tactcaggctgtctcaaagatattgaaatttcccggacaccatataatcttttaagtagt
cctgactatcttggcattaccagggggtgcacattgcagaatatctacacagtcagcttc
cctaaacctggctttgtggagatgccgccaatccctcttgaagtgggaacagaaattcac
ctgtccttcagtactaaaaatgaatctggtatcatactctttggtactaatgaaatacct
gtacctccaagaaggaaacgcagacaaacagggcaggtgtattatgctgtattcctgaat
ggaggtcgacttgaagtacatatttctactggagtaagagaaccacgcaagattgttgtg
aaacctgagtctggcgagtttcatgatggcaaagaacactccctttggttggagagactt
ggagggctgtttgccattcaagtagatgaggacagaagacagtcccaacgtctcccaaca
gaccaagctatctccattaaaaggctttttgtgggaggaacaccacctgaatttcacaca
ctcccaattaaaagcatacctgcctttgatggctgtatatggaatctggttgtcaatgct
gttccaatggatttcgcccaatcagtagcctttgaaaatgcagatataggacagtgtcct
gattcaggacaacatcatgaaaaggaggatgaagatggaactcctgaaacaacaagtcat
cctgaaccagagaaggaagaaaggaaagcaagtacaacttctcctcctcctcctcctttc
ccacctttaccggagcattgtgctgctgatgtggagcccattgccttggaaggggccatg
caatttggcctctcaagaaacagccatattgcagttgcatttgatgacacaaaagttaag
aacaaactcacaattgaacttgaaatcagaacaaaggctgaaaatgggctgcttttctac
atggctcggatcaatcatgctgattttgccactatccagataaaaaatggttttccgtat
ttcagttatgaccttgggcatggaaacacaagcactatgattcccaacaaaatcaacgac
ggccagtggcacaagataaaaatattccgaagcaaacaacaaggagtcctgtcagttgac
ggaactacaaataggaccactagcccaaagaaagctgatattttggatgttgtggggatg
ctgtatgttgggggattgccaattaactatacaacaagaagaattggtccagttgtctac
agcattgatggatgtatgcgaaactttagaatgtcagaatctcccattgatctaaataat
cctacctccatctacaacgttggaagatgctttgtcaatccacaggaaggaacctacttt
gcagggacaggatttgccaaaacagttggagcatataaagtgggactagacttacaggtg
gaatttgaatttcgtacaacacggacaaatggtgttctgttgggaatcagcagtcagaaa
atggatggccttggcattgagttggtagatgaaaatgtgatgttccatgtcgataatggt
gctggtcggttttcagccatttatgaacctgctataacagggagtttgtgtgatgggcat
tggcacagagtggtggcacacaagatgaggcatcgtttaatgctgacagtggatgatcag
cacgtggaagggatcagccctaatgcagcttccacttcagcagagacaaatgatcctgtc
tttgttggaggatatcctgatggattgaagcagtttggcctgaccactaatattcgattc
aaaggctgcattaggtctctgaaactcatcaaagggacagccaaacccctggagattaac
ttcagcaaggccttggaaataaagggagtgcaacctctgtcctgccctgggaattaa
DBGET
integrated database retrieval system
