Thamnophis sirtalis (common garter snake): 106550130
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Entry
106550130 CDS
T06107
Symbol
TRIM59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106550130 (TRIM59)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106550130 (TRIM59)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
U-box
zf-RING_6
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
106550130
NCBI-ProteinID:
XP_013923412
UniProt:
A0A6I9YGV9
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MHYFEEELTCSICYSIFDDPRVLPCSHTFCRNCLESILQISSNFSIWRPLRLPLKCPNCR
SIVEIPPSGTDSLPVNFALKAIIEKYQQEDHPEVATCSEHYRQPLNIYCLLDKKLVCGHC
LTIGKHHGHPIDDLQSAYMKEKETPGRLLEQLTDKHWSEVCLLIQNLEEQKAQCGSIVQE
DKKTVLQYFKRLGDVLDQKKQALLGALDDVNMQIEAEYEPLIEMLKGIREEQLELMSLNT
SFQEEESPLHFLEKVEEIRQRVKILREKPLPMIKPVEIHPRIGQVLKDVWSKSEINQINK
ILIPKIKLISKQKVCTQNCNNETRPAKKSFWSFSPVAIILLSFIFFIVTFSQHILTFINE
IVFPYIFDTLQIIYQDLSKRLHIAVENTMIYP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcattattttgaagaggagttaacttgttctatatgctacagtatatttgatgatcct
cgtgttctgccatgttcgcatacattttgtagaaattgtttggaaagtattcttcaaata
tcaagcaatttttccatatggcgccccctaaggcttcctctcaagtgtcccaactgtaga
agtattgttgaaattcctccatctggtacagactctttgcctgtaaactttgcattaaag
gctattattgaaaagtatcaacaagaggatcatcctgaagtagctacctgcagtgagcat
tatagacaaccactaaatatttactgtctactagacaaaaaacttgtgtgtggccattgt
cttacaataggaaaacatcatggccatcctatagatgacctacaaagtgcctacatgaaa
gaaaaagaaactcctggaagactccttgagcagttgaccgataaacattggagtgaggtt
tgtttgcttattcagaatctggaggaacagaaagctcagtgtgggagcattgttcaggag
gataaaaaaacagttttgcaatattttaagagacttggagatgtccttgatcagaaaaaa
caagctttacttggagcgctggatgatgtaaatatgcaaattgaggcagaatatgaacct
ctcatagaaatgttgaaaggaatacgagaggagcaacttgaactaatgtcactaaataca
tcgtttcaagaagaagagtctcctcttcattttctggagaaagttgaggaaatacgtcag
cgtgttaaaattttaagggaaaaaccattaccaatgattaagccagttgaaatccatcct
cgaataggacaggtgttaaaagatgtgtggagcaaaagtgaaattaatcagattaacaaa
attctcattcccaaaataaagctaatttcaaagcagaaagtatgtacccagaattgtaac
aatgagaccagaccagctaaaaaatccttctggtccttcagtcctgtggcaattatatta
ctttcttttattttttttattgttacatttagccaacatatattaacattcataaatgaa
atagtttttccatatatttttgatactttgcagataatttatcaagacttaagtaaaaga
ttgcacatagcagtggaaaatactatgatatacccctga
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