Thamnophis sirtalis (common garter snake): 106550132
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Entry
106550132 CDS
T06107
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550132 (SMC4)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
106550132 (SMC4)
Condensin II
106550132 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Bacillus_HBL
THOC7
AAA_29
HALZ
Motif
Other DBs
NCBI-GeneID:
106550132
NCBI-ProteinID:
XP_013923418
UniProt:
A0A6I9YGK2
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MPSKRTKVSTAAHQKGNDSLEESSNDGKHEREASRQPPEVPQQAVSNGVVDDQSLEEILS
SISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVI
DSMLFVFGYRAQKIRSKKISVLIHNSDEHSDIQSCTVEVHFQKIIDKEGDDYEVIPNSSF
CVSRTAYKDNSSIYNINGKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKSKGQ
NEHDEGMLEYLEDIIGSGRLKEPIQTLCRRVEILNEQRGEKLNRVKMVEKEKDALEGERN
KAIEFLSLENKMFKEKNKICQYYIYELQKRIYDLEAEKGKIHEDTKEVNEKSSKLADEMR
DKNEALKEVEKKLSKITAFIEENKNKFNQLDLEDVQIRENLKHAKSKSKKLEKQLQKDKE
KVEEFRTVPASSESAITEATAKREILEKGKEKAEEKLKEVMDSLKKETQGLQKEKEGKEK
ELMEFSKTVNEARSNFDVTKSELDLYLSRHNTAVSQLKTTEDALQTASGTLKERLTAIKE
LESKLPQTENELKKKENELDRLVKEEADMKYYIGDLRQKVEEAKSSLAINRSRGKVLEAL
IQQKKSGNISGIYGRLGDLGAIDEKYDVAISSSCGALDHIVVDTIDTAQKCVNFLKKQNI
GVATFIALDKMAVWEKSMGKIQTPENIPRLFDMVKVKDENVRQAFYFALRDTLVANNLDQ
ATRVAFGKGNRWRVITLQGQLIEQSGTMTGGGGKVMKGRMGSSVIVETSEEEVHEMESQL
QTKSQKAMLCQEQKTQLEEIIAKLHKNIREMKNTLEKYTASIKSLMDQEAHLKVQVKELE
ANVIASAPDKVKQIEMEKKCNNLKEEYDKVAAEADKLEKEVKRLHNLIIEINNKKLKAHQ
DSLDKINKEIDQCTFAITKAQVAIKTSERNLKKTEDAIVRTEKEIEENKNHMQTLKEQLT
ALDEKAAEVINNSKKAEESLPEIQEERCLVLQKIKAIQEEEHLLQKEALNIRLKIEQLDS
HIAEHQLKIKYWQKEISKISLHSVEAEQQENLPVLTQDELENINDPDIIKNQIAILEAQC
HEMKPNLSAIAEYNKKEELYLKRVAELDDITNERDKFREAFEGLRKKRLNEFMAGFNVIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLI
GIYKTYNTTKSVATNPKIIASKGLAEPASTECL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaaaagaactaaagtatctacggcagcccatcaaaaaggcaatgattccttg
gaggagtcctctaatgatgggaaacatgaaagagaagcgagcaggcaaccccctgaagta
cctcagcaagcagtatcaaatggagtagttgatgatcaaagtttagaagaaattttgagt
agcatctctcctcccccacctccagctatgaccaatgaagctggagctcctcgtctcatg
ataactcacattgtaaaccagaacttcaaatcttatgctggggagcaaattctaggaccg
tttcataagcgtttttcatgcattattggacctaatggcagtggaaaatctaatgtgatt
gattccatgctctttgtttttggctatcgagcacaaaaaataagatccaaaaaaatttca
gtactgatacacaattctgatgaacatagtgacatccagagctgcactgtagaagttcat
tttcaaaagataattgacaaggaaggggatgattacgaagtcattcccaacagcagtttc
tgtgtttccagaacagcctataaagataattcttcaatatacaatatcaatgggaagaaa
gcaacttttaaagatgttgggcttttgctccgaagtcatggtattgacctagaccataat
aggtttctgattttacagggagaagttgaacaaatagcaatgatgaaatcaaaagggcag
aatgagcatgatgaaggcatgcttgaatatttagaagatataataggatcaggacgattg
aaagagcctattcaaacattatgtcgacgagtggagatattaaatgaacaaagaggtgag
aagttaaacagagttaaaatggtggaaaaggaaaaagatgccttggaaggagaacggaat
aaagcaattgaatttctttctttggaaaacaaaatgtttaaagaaaaaaataaaatctgt
caatactacatttatgaattacagaagcggatatatgacctggaagcagagaaaggaaaa
atacatgaagacaccaaagaagttaatgagaagagcagcaaactggcagatgaaatgaga
gataagaatgaagctctgaaagaagtagaaaagaaactcagtaaaatcacagcatttatt
gaagaaaataaaaataaatttaaccagctggatttggaggatgttcaaattagggaaaat
cttaaacatgcaaaaagcaaatcaaagaaactagagaagcagcttcagaaggataaagaa
aaggtagaagaattcagaactgtacctgctagcagtgaatctgcaattactgaagcaaca
gctaagagagaaattctagaaaaaggaaaagaaaaagcagaagaaaaactaaaagaagtt
atggacagtcttaaaaaggaaactcaaggactgcagaaagagaaagagggtaaagaaaaa
gaactaatggaattcagcaaaacagttaatgaagcacgttcaaattttgacgtgaccaag
tcagaacttgatctatatcttagtcgtcataatactgcagtatctcagctaaaaacaaca
gaagatgctcttcagactgcttcaggaacacttaaagaaagattaactgctatcaaagaa
ttggaatcaaaattacctcaaactgagaatgagctaaagaagaaagaaaatgaattggat
agacttgtaaaggaggaggcggacatgaaatattacattggagatctacgtcagaaagta
gaagaagcaaaaagttcattggcaataaatagaagccgaggaaaagttcttgaagccttg
attcagcagaagaaatctggaaatatttctggaatatatggaagacttggtgatttggga
gctatagatgaaaaatatgatgttgcaatatcatcatcatgtggagcgttagatcacatc
gttgttgatactattgatacagctcaaaaatgtgttaatttcttaaagaagcaaaacata
ggagtagcaacatttatagctcttgataagatggcagtatgggagaaaagcatgggcaaa
attcagactcctgaaaacattcctcgtctatttgacatggtgaaagtgaaagatgagaat
gttcgccaagccttttattttgcattgcgtgatactctagtggccaataacttggatcaa
gcaaccagagtagcatttggaaaaggcaataggtggagagtaataacattgcaagggcaa
cttattgaacaatcaggaacaatgactggtggtggaggaaaagtaatgaagggtagaatg
ggatcctctgttatagttgaaacatccgaagaagaggtacatgaaatggaatcacaattg
caaacaaaatctcaaaaagccatgctatgtcaggaacagaaaacacaactggaggaaata
atagcaaaattacataaaaatattagagaaatgaaaaatactctagaaaaatacactgcc
agtataaagagtttgatggatcaagaagctcacttaaaagtccaggttaaagaactagaa
gcaaatgtaattgcttctgctcccgataaagtcaagcaaatagaaatggagaaaaaatgt
aataacctcaaagaagaatatgacaaagtggctgcagaagctgacaaactggaaaaagaa
gttaagagactacataatctcattattgagataaataataaaaaacttaaagctcatcag
gacagtcttgataagatcaacaaagaaatagatcagtgcacttttgccattacgaaagca
caagtagcaatcaagacatcagaacgaaacctgaaaaaaacggaggatgcaattgttcgc
actgagaaagaaattgaagaaaataaaaaccatatgcaaaccttaaaagaacagctgact
gcattagatgaaaaagctgctgaagttataaataacagcaaaaaagctgaggaatcccta
ccagagattcaagaggaacgttgtttggtgcttcagaaaattaaagctatacaagaagaa
gaacatttgctacaaaaagaggctctaaatattaggcttaaaattgaacagctagacagt
cacattgctgagcatcaattaaagattaagtattggcaaaaggagatatcaaagatatca
ctgcattctgtggaagctgaacaacaagaaaaccttccagtgctaactcaagatgaacta
gaaaatattaacgatccggatattataaaaaatcaaatagctattttggaagctcagtgt
catgaaatgaaaccaaacttgagtgccattgctgagtataataaaaaggaagagctgtat
ctaaaacgtgtggcagagttggatgatattaccaatgagagagacaaattcagagaagct
tttgaaggccttcgaaaaaaacggcttaatgaatttatggcaggatttaatgtcataacg
aataagctaaaggaaaattatcagatgcttacgttaggaggggatgcagaacttgagctt
gttgacagtctggatccgttctctgaaggaattatgttcagtgttcgaccaccaaagaaa
agttggaagaagatatttaacttgtcaggtggagagaagacattaagctcattagctttg
gtttttgctttgcatcattacaagccaacccctctctatttcatggatgaaattgacgct
gcccttgactttaaaaatgtttccattgtagcattttacatatatgagcaaacaaaaaat
gcacagttcatcattatttctctgcgaaacaacatgtttgaaatagcagacagacttatt
ggtatttacaagacttataatacaacaaaaagtgttgcaacaaatccgaaaattattgca
tcaaagggacttgctgaacctgcttccaccgaatgcttatga
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