Thamnophis sirtalis (common garter snake): 106550220
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Entry
106550220 CDS
T06107
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106550220 (ATXN1)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
106550220
NCBI-ProteinID:
XP_013923560
UniProt:
A0A6I9YIA1
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Position
Unknown
AA seq
802 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSLPSEVKPLFLASENHRADNITWLSSTTSSHSSGRNRS
GGTSVEAGSQQGVGLHKSLSTGMDYSPPSAPRSVPASATLSTVYPSALSQAGTPVSPVQY
THLQHAFQFVGPQYSGPYAGFIPSPLISPTANSATTTAASATAVATTPSQRSQLEAYTSL
LATMSNLSQQSQKVEPHLVRTPGLITAGSPPPIQQNQYVHISSSQSAVRNVSPPAIPVHL
HPHQTVIPHAFALGPSSQVVVQYADSGGHFVTREPTKKSESGRLQAMQAKEILNGEVDKN
RRYGISPSSEVNLLKSGNKPPPHHYEARHVVVHSGPTDYIARDSSAVRPSVMVVPNSSTP
TADMEVQQSANRETPPSAINEKGSLHLGKTGHRSYALSPQQTIGHEGVKAVATLSPHTVI
QTTHSASEQLPVGLPATAFYTGTQPPVISYLSSQQQAFGYPGSLPQHLVIPGTQPLLIPV
GSADIDSSGMPPAIATSSPQLAAVPHTFVTTAIPKSENFNAESLVNQTAYQAAVVQAQIH
LPLVQPVPPSATAPAILPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISSDLKIDSS
TVERIDDSHNPGIAMIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPC
SKLSVGDVCISLTLKNLKNGSVKKGQSMDSASILLKHSKNDSLVGSRHRYVEQENGIDQG
GVKMTSENGELKFPNKIGLPAASLLTKSESSKPTATRKRRWSAPETRKLEKSEEEPPLTL
PKPSFIPQEVKICIEGRSNVGK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagagaagcaatgaatgcctgccccccaagaagcgggaaatccct
gccaccagcctgccttctgaggtgaagccgttatttctggccagtgaaaatcaccgcgcc
gataatataacatggctctcgagtacaaccagcagccacagcagtgggcggaatcggtct
ggaggtacttcagtggaggctggttcacaacaaggagtaggtttacacaagtcactttct
acaggaatggattattccccacctagcgctcctaggtctgttccagcctccgccacactt
tccacagtgtacccctctgcactttcacaggcaggaacacctgtttcgccggtgcagtac
acacacttgcagcatgctttccagtttgttgggcctcagtatagtggaccatatgccgga
ttcatcccttccccactaatttccccaacagctaattctgcaaccaccacagcagcctct
gccactgctgttgcaaccactccatcccagcggtcccagctggaggcatatacttctttg
ctggccaccatgagcaatcttagccaacaaagccagaaagttgagccgcatttagtcagg
acacctggattgatcacggcaggatctccaccacctattcagcaaaaccagtatgtccat
atttccagctcccagagtgctgttagaaacgtctctcctccagccatcccagtccatttg
catcctcaccagacagtgatccctcatgcctttgccctcggcccttcctcccaggtggta
gtgcaatatgcagattctggcggccattttgtgactcgggagcccactaagaaatctgag
agcggacggttgcaggctatgcaagcaaaggaaatactgaacggggaagtagacaagaac
aggcgatacggcatctcgccctcttctgaagtcaatcttctcaaatcaggcaataaacca
cctcctcatcattatgaggccagacatgtggtagtccactctggtcctactgattatatt
gcacgtgattcctcggctgtccggccctctgttatggttgtccccaacagcagtacgcct
actgcagacatggaggttcagcagtccgccaacagagaaacacctccttcagccatcaac
gaaaagggtagtttgcatttaggaaagacaggccaccgatcctatgctttatctccacag
cagactattggtcatgaaggggtgaaggcagttgccactttatcccctcacactgtcatt
cagaccacccatagtgcttcagagcagctgcccgttgggttgccagctacagccttttac
actgggactcaaccaccagtgattagctatctgagcagtcaacagcaagcctttggctat
cctggaagtctaccacaacatctggtgatccctggtacccaacctctcttaataccggta
gggagtgcagatatcgactcctcggggatgccacctgctatagccacttcgtctccccag
ctagcagccgtgcctcatacgtttgtcacaaccgccattccaaaaagtgagaatttcaat
gctgagtccctagtaaaccagacggcttatcaggcagctgtggtccaggcccagatccat
ctccccctggtccagccagtcccaccttccgcaacagctcctgctatattgcctccttat
tttatgaaaggctctataattcagttggcgaatggagagctgaagaaagtggaagactta
aaaacagaagactttatacagagtgcggaaattagcagtgacctgaaaatagactccagc
accgtggaaagaattgacgacagccataatccaggcattgctatgatacagtttgcagtt
ggagagcaccgagcacaggtcagtgttgaagttttggtagaatatcccttttttgtattt
ggacaaggctggtcatcttgctgccctgagagaacaagccagctctttgatttgccgtgt
tccaaactctctgttggtgatgtctgcatatcacttacactcaagaatctgaagaacggc
tccgttaaaaagggccagtccatggactcagctagcatcttgttgaagcactctaaaaat
gacagtctagttggcagtagacataggtatgtggagcaggaaaatgggattgatcaagga
ggggtcaagatgacgtctgaaaatggtgaactgaagtttccaaacaaaataggattacct
gcagcatctctactcaccaaatcagaatccagcaagcccacagcaactcggaagcggagg
tggtcagcccctgaaacacggaaactggagaagtctgaagaggagccaccgttgactctt
cccaagccttcttttattcctcaggaggttaagatttgcattgaagggcgatccaatgta
ggcaagtga
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