Thamnophis sirtalis (common garter snake): 106550226
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Entry
106550226 CDS
T06107
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
tsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106550226 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106550226 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106550226 (SNW1)
Spliceosome [BR:
tsr03041
]
Complex B
Other components
Prp19-related factors
106550226 (SNW1)
Complex C
106550226 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
Motif
Other DBs
NCBI-GeneID:
106550226
NCBI-ProteinID:
XP_013923565
UniProt:
A0A6I9YIA6
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLELEERARSQRVRQTALVSSRREPPPYGYRKGWIPRMLEDFGD
GGAFPEIHVAQYPLDMGRKKKISNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAVKELTEKTRVALEKSVSQKIAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHMEKEDGEVRERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEIQYDQRLFNQNKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYGDDLETRIKTTNRFVPDKEFS
GSDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSNRPKEHDHEGKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaccagttttttaccagcaccaacccagttgtctcaggaccaactggaattg
gaggagagagcaagatctcaaagagtgagacagactgcgttggtgtcatcacgaagggaa
ccacctccttatggttatcggaaaggatggataccacgaatgttggaggattttggagat
ggaggtgctttcccagaaatccatgttgcccaatatcctctggatatggggagaaaaaag
aaaatatccaatgcattagctgtacaggtggatgccgaaggaaaaatcaaatacgatgct
atagctcggcagggacaatcaaaagacaaggtcatttacagcaaatacacagaccttgtt
cccaaagaagttatgaatgtggatgaccccgagcttcaaagaccagatgaggaagctgtc
aaagagcttacagaaaagacacgagttgcactggaaaagtctgtctctcaaaaaatcgca
gcagcaatgccagtccgagcagctgataaactagctccagctcagtatattcgttataca
ccatcacagcagggagtggcattcaattctggtgcaaaacagagagttattagaatggtg
gaaatgcaaaaggatcccatggagcctccaagattcaagattaataagaaaattcctcgt
gggccgccatctccccctgctccagtaatgcattctcccagtagaaagatgactgtaaag
gagcagcaagaatggaaaattccaccttgtatttcaaactggaaaaatgcaaagggttac
accattccgttagacaaacgcctggctgcagatggtagaggattgcagactgtacacatt
aatgaaaactttgctaaattggcagaagctctttacattgctgatagaaaggctcgtgag
gctgtagaaatgcgagcccaggtagaacgcaaaatggcacagaaggaaaaagagaaacat
gaggagaaacttcgggaaatggcccagaaggccagggaacgaagagctggaatcaaaact
catatggagaaagaggatggagaagttagggagcgtgatgaaatcaggcatgacaggcga
aaagaaaggcagcatgatcggaatctttccagagcagcccctgacaaaaggtcaaagcta
cagagaaatgagaacagagatattagtgaagtcattgcattgggcgttcctaatcctcgg
acatccaacgaaattcagtatgaccagagactgttcaaccaaaataagggcatggatagt
ggctttgcaggaggagaagatgaaatttataatgtctacgatcagccctggagaagtggt
aaagacatggcccaaaatatatacagaccaagtaaaaatgtggataaggacatgtatggt
gatgatttggaaacaagaataaaaactactaacaggtttgttcctgataaggaattttct
ggttcagaccgtagacaaagaggaagagaaggaccagttcaatttgaggaagatcctttt
ggtttagacaaattcttggaggaggcaaaacagcacgggggttctaaaagaccttctgat
agcaaccgccctaaagaacatgatcatgaaggcaaaaagagaaggaaagagtaa
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