Thamnophis sirtalis (common garter snake): 106550244
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Entry
106550244 CDS
T06107
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106550244 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106550244 (EXOSC4)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106550244 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
106550244 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106550244
NCBI-ProteinID:
XP_013923587
UniProt:
A0A6I9YHC7
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSEQGYRVDGRRAGELRQIRARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSKALPDQALVNCQFSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTRLFPRSQ
IDIYVQILQADGGNYCASVNAATLAVIDAGIPLRDYVCASSAGFVEESALADLNYVEEAA
GGPQVALALLPKAGQIALLEMNGRLHEDHLERIAEAARKACLDVHAVLDQVVREHLRQGA
ALAGT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttggagctgctgtcggagcagggctaccgcgtggacgggcggcgcgccggc
gagctccgccagatccgcgcccgcatgggggtcttcgcgcaggccgacggctccgcctac
ctggagcagggcaacaccaaggcgctggccgtcgtctacgggccccacgagatgcgcggc
tcccggagcaaggcgctgccggaccaggcgctggtcaactgccagttcagcatggccacc
ttcagcacgggcgagcgcaagcggcggccccacggcgaccgcaagtccagcgagatgacg
ctgcacctgaagcagaccttcgaggccgccatcctcacgcgcctcttcccgcgctcccag
atcgacatctacgtgcagatcttgcaggcggacggcggcaactactgcgcctcggtcaac
gccgccaccctggccgtgatcgacgccgggatcccgctgcgggattacgtctgcgccagt
tcggcgggcttcgtggaggagagcgcgctggccgacctgaactacgtggaggaggcggcc
ggggggccgcaggtggcgctggcgctgctgcccaaggccggccagatcgccctgctggag
atgaacggccggctgcacgaggaccacctggagcgcatcgccgaggccgcccgcaaggcc
tgcctggacgtccacgccgtgctcgaccaggtggtgcgcgagcacctgcgccaaggggcc
gccctggccgggacctga
DBGET
integrated database retrieval system
