Thamnophis sirtalis (common garter snake): 106550252
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Entry
106550252 CDS
T06107
Symbol
BRCA2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03440
Homologous recombination
tsr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106550252 (BRCA2)
03460 Fanconi anemia pathway
106550252 (BRCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106550252 (BRCA2)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550252 (BRCA2)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106550252 (BRCA2)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106550252 (BRCA2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106550252 (BRCA2)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106550252 (BRCA2)
FA (Fanconi anemia) pathway
Downstream FA components
106550252 (BRCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
106550252
NCBI-ProteinID:
XP_013923597
UniProt:
A0A6I9YHD6
LinkDB
All DBs
Position
Unknown
AA seq
3050 aa
AA seq
DB search
MEKKNVDISAKKPSLFEIFKTQFSESDLGPISLNWFEELSSEAPPFDVKITEDPLYKTMD
QNTFKTPKGKLSMNNSSVSTPMIFKDRNKNLKTSTSPVEKSAQSSEETGKTFSEMPRLRT
QVDESNEGMNLSRSCVIASPVIQEKQKNKYVLNESLLQTPKIFEVQTQKCISESLGAEAD
PDMSWTSSLATPPTLSPTVIIERRNDSISGTKIHNEIIDITMCGLFSKHGKSLKSNNINR
QSSSGIEISHAEMDNKIHTLESFLNESFDKNAFPVELQGSQKPSNVPKDEDNHGGMSDFS
LNIASSSVFLKKINSVEENKKALFYEKNHDKLEKEHEMIKASNETKFERKLKSSKCNLNT
NVPKIQNAVNRKENMTSSLLCPWSQLDLSGFELTQLEKKFVKSISSSSTLQVKKTSPGSP
SSIEKKCSSPKILKSSMLNTPCVIQRGKMSSPEKLSISENSPLLIKNDSVSLKHAEDEEF
SSVNFSKNNYFLMNRTLTESSEVQSIHSDFSRKDKNSSGHQVSNQAASDGRQHTKSSLKN
ISSLSSLKRRPKKFIYALNNSLVQREKGTTQRDGSLTCFVPVCTNLETGTSELSEIRIKN
EGQIETADHSTKERKEIDSEKCYTSTNMLYETKGSNKSNIEHNTSDSSALLLKNNMKKEA
VMFSRDLAANYQTEVTEKGFHEICHSNTLVDRKTDFTNYNSSQEALIEACTMPMQVSETE
NKQVTLELTAQLLDSGIHSTKASKSITMLLEQEMDTKLSPLLSLKEGAPGDKQRELECLC
LGKIQKGFKTASDKQIVLSDDKIRKGKLLFKDIEDRLLEDFQNEEKSAISSQNKQENAEN
FSVGQNELNSHVSDSVVNFIRSDDTKIGLPEYGNKSVQNVLKNQHPEEKHNLTASQVAEI
TELSNILEETDSQFEFTQFRKHKTMMYNNTNETRCLDKKCLNSKNCKDMGFVDDPGDNQS
SFKHIDTWERNTDRQSNNHIILLESNRKENNCFVPVISDPLQSDLGNHSSVKNKDEITRR
GTELASNKKGMGEILNSYKIKMNGSNKCSSWHMPMKEIDIDWPQKAKKGNAEYIIQGTTK
DTTIAFVKENTENKLKDVDCHKDSVVQITSTTEVNLKIIQKYSVHISENELLSTKNQNAL
SLHFVNCGKTCCNNNCPETLSDLTCLVEVAKTEKNNTWNDAGAKESFISEQEEKVNKPEK
QYFLQSVHTVTDGNTFAEKSKRLNLLTGSDIQEEINNMSYCKRKTNARHKQVIPSMNEST
ELNQTEIFLGCNHKNVSENREKQTDGFHTASGKQITFTDKSLLKARHLLSEEALCGNMNN
TGSLIKFSVEDSVKKNFTFGEGGEKCREIGHSKDNFEDSLGVLSNMVKQGLKSGLIFKGL
ALNINASESYFHGGKKISILKEAYKNQDWMTSKCDLHLLDTGTLQKYPTNEARTSTSKQS
KVNPPAFSFKTASDKTVKVSPKALKNAQQFLHKNYSNLLGSSLDAFGSKNCITSGYLNVE
EMPMRYLDVSQFPTTKELCRTAQTLPCAMPMVVDTVFETNRETSDKSFEMGKCFNTWVST
KGNCISDFSTNKCMFFSTASGKPVQLSKESLNKARQFFSEIEPNLSGHQNFVSDDNFSCN
KIHTVKNMNASESDVNAGTNANISGETCQNENWMTPKCSSHFLDISTLEKSSTNGEKDSP
SKQLKARPAAFSFTTASGKTVNVSQKALKNAQHFLHKNLNNLESQSEINKGNTFGSSSDA
CGSRDCIGSSYLRVEKIPTEYSGLTQFPVTKKICESSQALSCVVPKSMETVPELNCKASN
DFIEMHTCSDTRTSNKKKCKPDFSTDNCGFFSTASGKPVQLSKESLKKASLLFSEIESDL
SVYQNSDPDCNYDYNTVNSNRKKIFPRENKLHISQRGENPNVEEHSGIPCDFNKACGKQV
KISHKALQNVMGLLKEFDDINASDFFVDESLNQTHNSPIKTPITKVKQEHEANSSSKLKE
KCKTRENLNENKTIKSLLNIEIPMSITSTEKYKQPAEFKRRFSCSKELTEPLKITQPCQS
RVSTKYASEGNLDCFCPAYSQTSDNYSDVEASESAKAFIEDDDFTDSEVQRNIQKSILTA
NNSLLRTRSGKRHLEKENTFGQPPIKRKLLPEFEQSEKSSRSPFKSSPYDITKMTTYLQY
ARNLQQMRITKKQDQIIHPQPGSLYLVKRSSGLCRIPLKASVKEKLPDFYSSEQLYVFGV
SKQCIKINSTNAEDFQFLIQDFFSKKYFLEDHGIQLADGGYIIPNDEGKAGKEEFFWALC
DTPGVDPNLISKAWVYNHYKWIVWKLAAMEVAFPLHFASKCLTPEGVLLQLKFRYDIEVD
KSQRSAIKRITERDDVAGKTIILCISKIISLSTNMPHSADSKSTTEDNKKDVAIIEVTDG
WYGIRAVLDPPLQSLLSRQKLSVGQKIVVHGAELVGSQDASTPLEAPETLMLKITANSTR
RARWYAKLGYYRDPRPFSLPLCSLFSDGGTVGCIDVIVQRIYPLQWMEKLSTGSCVFRNN
RAEQREAEKFAENRQKTLEALLAKIQAKFEETDVLFKNIGMVDQAEFKVCHVSNSLTFST
KKVQNSYLFQFYHCLLQGFFNEDQLKALNSHRQMVNDKRRAQIEAAFRKAVESAEQEKNS
SCRRDVSNIIKLRIVDYGTKENSKEVILNIWRPPSHVCSLLKEGGRYRILQLSASHSKGK
LKTSNVQLTATKKTQYLQLPVSQESLLQVYRPRECLLYGKLMEPSFRPPCSEVDLVGYVV
YLTKRAGFSTLVYLSDEHHNIIAIQICTDLKLFAIEDIIIPYALISATNLQWRPEFKSQI
PTLFAGELSAFSSNPKEKHLQEIFEEFKNAIQNDGCFSKEAQCKVMNFLKSDPLHLLNFS
KECGLDPPWKCDAGNKQAITIPNSELRHQSPLTIGKLDIKPSFSLGSAKVTPDFQETPKN
CKKRKAMDLLSRVPSPPPVKPICIFISPPLKKAFQPPRSSCGQSKTSIKKTERKNSKHPL
LKLNGADYAPETNFVADEELAMINTQDLLSNFSEQGIVSMGDTEHVISNT
NT seq
9153 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaaatgttgatatatctgcgaagaaaccatctttgtttgaaatattcaaa
acacaattcagtgaatcagacctaggaccaataagtctcaattggtttgaagaactcagt
tcagaagctccaccttttgatgtgaaaataacagaagaccctttatacaaaactatggat
caaaatactttcaaaaccccaaaagggaaattgtctatgaataactcatcagtatcaact
cccatgatttttaaagaccggaataaaaatttaaaaacatctacttctcctgtagaaaaa
tcagctcagtccagtgaagaaacaggtaaaactttcagtgaaatgcctaggctgagaaca
caagtggatgaatcaaatgaaggaatgaatctttctcgttcctgtgtgattgcaagtccg
gtcatacaagaaaaacaaaaaaataaatatgtactaaatgaaagtttattacaaacaccc
aagatttttgaggttcagacacagaaatgcatttctgagagcttgggagcagaagcagat
cctgatatgtcttggacaagttcattagcaacaccacctacactttctccaactgtcata
atagaaagaagaaatgattcaatttctggaacaaagattcataatgaaataattgatatt
accatgtgtggccttttttccaaacatggaaaaagtctcaagagcaataatattaatagg
caatcttcatcaggaattgaaatttcacatgcagaaatggacaacaaaatccacactctt
gaaagttttttaaatgaatcttttgataagaatgcatttcctgttgagctacaaggatcc
caaaagccatcaaatgtaccaaaggatgaagataatcatggtggaatgagtgatttttct
ctgaacattgccagcagcagtgtttttcttaaaaaaattaattcggttgaggagaataaa
aaagctcttttttatgaaaaaaatcatgataaacttgaaaaagaacatgaaatgattaag
gcttctaatgaaacaaaatttgaaagaaagttaaaatcttctaaatgtaacttgaatact
aatgtcccaaaaatacagaatgcagtgaatagaaaggagaatatgacatcatctttgctt
tgtccgtggtctcagttggacttgtctggttttgaactaacgcagcttgaaaaaaagttc
gtaaagagcattagttcatcttctaccttacaggtcaagaaaacttctccaggtagtcca
tcatctattgaaaaaaaatgcagtagtcctaaaatattaaaatcatctatgttaaacaca
ccatgtgtaatacaacgtggtaagatgagttctccagaaaagttatccatttccgaaaac
tcacctttattgattaagaatgattccgtgtcattgaaacatgctgaggatgaggagttt
tcttctgtaaatttttcaaagaataattatttcttaatgaatagaactttaacagaatcc
tcagaagtccaaagtattcactctgatttctcaagaaaagataaaaattcttcaggccat
caagtttcaaatcaagctgctagtgatggcagacaacacacaaaatcaagcttgaaaaat
attagctcactttccagtttgaaaaggcgacccaaaaaattcatatatgctctaaacaat
tctctagttcagcgggaaaaaggaaccacccagagagatggatctcttacttgttttgtg
ccagtatgtacaaatttagaaactggtacctctgaactttctgaaatccgaatcaagaat
gaaggacaaattgaaactgctgatcattccacaaaagaaagaaaagaaatagattctgaa
aaatgctatacatctactaacatgttatatgaaactaaaggtagtaacaagtcaaatatt
gaacataacactagtgatagttcagcactacttctaaaaaataatatgaagaaagaagct
gtaatgttttccagagatcttgctgctaattatcaaacagaggtaactgaaaaaggattc
catgaaatctgtcacagcaatactttggtggatagaaagactgatttcacaaattataat
tcatcccaagaagcacttattgaagcatgtacaatgccaatgcaagtatcagaaacagaa
aataaacaagtaactttggaattaacggcacaacttttagacagtggtattcattcaacg
aaagcatcaaaatctataactatgctgttggagcaagaaatggatacaaaactgtctcca
ttactaagtttaaaagaaggcgcacctggtgataagcagagagagttagaatgtctttgt
cttgggaaaatccagaaaggttttaagactgcatctgataaacagatagtgctatctgat
gataaaatcagaaaaggcaaattactgttcaaagatatagaagatcgacttcttgaagac
tttcagaatgaagaaaagagtgctatttcaagtcaaaataaacaggaaaatgctgagaat
ttttcagttggacaaaatgaactaaattcacatgtttctgattctgtggtaaattttatt
cgctcagatgatacgaaaattggtttacctgaatatggcaataagtctgttcaaaatgtt
cttaaaaatcagcaccctgaagaaaaacacaatttaaccgcaagccaagtagctgaaatt
actgaactttctaatatattggaagaaacagacagtcaatttgaatttacccagtttaga
aaacacaagactatgatgtacaataacactaacgagactagatgtttggataaaaaatgt
ttaaattctaagaattgtaaagatatgggatttgtggacgatccaggtgataatcagtcc
tcctttaagcatatagatacttgggaacgtaatactgacagacaaagcaacaaccacatt
atattgctggaatcaaacagaaaagaaaataattgttttgttccagttatttcagatcct
ttacagtctgatctgggaaatcatagttcagttaagaacaaagatgagattacaagaaga
ggtacagaattagccagcaataagaaaggaatgggtgaaatattgaactcctataaaata
aaaatgaatggttcaaacaaatgcagtagttggcatatgcctatgaaagaaatagatatt
gattggccccagaaagccaaaaaaggaaacgctgaatatataatacaaggtaccacaaaa
gatacaacaattgcttttgtaaaagaaaatacagaaaataagttaaaagatgtggactgc
cataaagatagtgttgtccagattactagcaccacagaagtaaacttgaaaattattcaa
aaatattctgtacatatatcagaaaatgaattgttatccactaaaaatcaaaatgcttta
tccctacattttgtaaattgtgggaaaacttgctgtaacaataattgcccagaaactttg
tctgatctaacatgtttagttgaagttgctaaaactgaaaaaaataatacttggaatgat
gcaggtgcaaaagaaagctttatttcagaacaagaggaaaaagtaaataagcctgaaaaa
caatattttctacagagcgttcacactgttactgatgggaacacatttgcagaaaaaagt
aagagacttaatttgttgacaggttctgatatacaggaagagataaataatatgtcctac
tgcaaaaggaagacaaatgctagacataaacaagttatcccttctatgaatgagagtaca
gaattaaatcagactgaaatttttttggggtgcaaccataagaatgtctctgaaaacagg
gaaaagcaaactgatggttttcatacagctagtggtaagcaaattacatttactgacaaa
tctttacttaaagctaggcatcttctttcagaagaagctctctgtggaaatatgaacaat
actggtagtcttataaaatttagtgttgaagattcagttaaaaagaattttacatttgga
gaaggaggtgaaaaatgtagagaaattggacattctaaagataattttgaagattctttg
ggagtgctgtcaaacatggttaaacagggtttaaagagtggactgatctttaaaggactg
gccttgaacataaatgcatctgaatcatattttcatggagggaaaaaaatcagtattttg
aaagaagcatataaaaatcaagattggatgacatcaaaatgtgatttacatttactggat
actggtaccttacagaaatatccaactaatgaagcgagaacctcaacttcaaaacaatcg
aaagttaatccacctgcattcagtttcaaaactgcaagtgataaaactgttaaagtttct
ccaaaggcattaaaaaatgcccaacaatttcttcataaaaactacagtaacttgttggga
agttctttggatgcttttggcagtaaaaactgcattacttctggttacttgaatgtagag
gagatgccgatgagatatttggatgtatcccagtttcctacaaccaaagaattatgtaga
actgcccaaacattaccatgtgctatgcccatggtagtggacactgtctttgaaacaaat
cgtgaaacttcagataaaagttttgaaatgggcaagtgttttaatacctgggtttctacc
aaaggaaactgcatatcagatttttctaccaataaatgtatgttttttagcacggcaagt
ggcaagcctgttcagttatctaaagaatcgctgaataaagcaagacaatttttttctgaa
attgaacctaatttatcaggtcatcagaattttgtttcagatgacaatttcagctgtaat
aagatacatacagtgaagaacatgaatgcatctgagtcagatgttaatgcaggaactaat
gccaacatatctggagaaacctgtcaaaatgaaaattggatgacaccaaagtgtagctca
catttcttggatattagtaccttagagaaatcatcaactaatggagaaaaagactcccct
tcaaaacagttgaaagctagaccagctgcctttagtttcaccacagcaagtggtaaaact
gttaatgtttctcagaaagcattaaaaaatgcccaacactttcttcataaaaacctcaat
aacttagaatctcagtctgaaataaataaaggtaacacctttggaagttcttctgatgct
tgtggtagcagggactgtattggttccagctatttgagggtagagaagattccaacagaa
tattcaggcctgacccaatttcctgtaaccaaaaaaatttgtgaaagctcccaagcatta
tcatgtgttgtacccaaatcaatggaaactgttcctgaattaaattgtaaagcttcaaat
gactttattgaaatgcatacgtgttctgatactcgaacttccaacaaaaagaaatgcaaa
ccagacttttctactgacaactgtgggttttttagcacagcaagtggtaagcctgttcag
ttatctaaagaatcactaaagaaagcaagcctacttttttctgaaattgaatctgattta
tctgtttatcagaattctgacccagattgcaattatgattataacactgtgaattctaac
agaaaaaaaatatttcccagagaaaataaattacatatatcccaaagaggggaaaatcca
aatgtagaagaacattcaggcattccatgtgattttaataaagcatgtggaaaacaggta
aagatttctcacaaggctcttcaaaatgttatgggacttttaaaagaatttgatgatatc
aatgcaagtgattttttcgttgatgaaagtttaaaccaaactcataattctccaataaaa
actcccattacaaaagttaaacaggagcatgaagctaattcgtcatctaaattgaaggag
aaatgcaaaaccagagaaaatctgaatgaaaacaaaactattaaatccttgctaaatatt
gaaatacctatgtccatcacttctactgagaaatacaagcaaccagcagaattcaaaaga
aggttttcatgttcaaaagaattaactgaacctttgaagataacacaaccatgccaaagc
agagtcagtactaaatatgcctcagaagggaatctggattgtttttgtcctgcttattcc
caaacttcagataattactcagatgtagaagcttcagaaagtgcaaaagctttcatagaa
gatgacgatttcactgattcagaagtacaaagaaacattcaaaaatctatcttgacagct
aataattctctgttacgtacaagaagtgggaaacgacatctggaaaaagaaaacacattt
ggacaacctcctattaaaagaaaactgctgcctgaatttgaacaatccgaaaaatccagt
agatcacctttcaaatcttctccttatgacataacaaaaatgacaacatatcttcagtat
gccagaaatttacaacaaatgagaattacaaagaaacaagatcaaataattcatccacaa
ccaggcagcttgtaccttgtaaaaagatcttctggtctttgcagaattcccttaaaagct
tcagtcaaagagaaattgcctgacttttattccagtgaacagttgtatgtttttggcgtt
tccaagcagtgcataaaaattaatagcacaaacgcagaagattttcaatttctcatccag
gattttttcagtaaaaaatattttctagaagaccatggaatacagttggctgatggagga
tatattattcctaatgatgagggaaaggccggaaaagaagaattcttttgggctttgtgt
gacacgcctggtgtagatcccaatctaatttccaaagcctgggtttataaccattataag
tggattgtatggaaactggcagctatggaggttgcatttccactgcattttgccagtaaa
tgtttgacaccagaaggagtattacttcagctaaagttcaggtatgatatagaagtggat
aaaagtcaacgatcagccatcaaaagaataacagaaagagatgatgttgctggaaaaaca
atcatactgtgcatctctaaaattatatcacttagcacaaatatgcctcacagtgccgac
agcaaaagcaccactgaggacaataaaaaagacgtggcaatcattgaagttacagatggt
tggtatggaattagggcagtcttggatcctcctcttcagtcactattatctaggcagaag
ctttcagttggccagaaaattgttgtacatggagcagaacttgtgggatctcaggatgca
agcactcctttagaagcaccagaaactctgatgttaaagattacagctaacagtactcga
cgtgctcgatggtatgcaaaattaggatattatcgtgatcctcggccattctctttgcct
ttatgctcattgtttagtgatggtgggactgttggttgcattgatgtcattgttcaaagg
atttatcctctacagtggatggaaaaactatcaacagggtcctgtgtgtttcgtaacaat
cgagcagaacaaagagaagctgaaaaatttgctgaaaatcgacagaaaactttagaagca
ctgttggcaaaaatacaagcaaaatttgaagagactgatgtcctattcaagaatataggg
atggtagaccaagcagaatttaaagtgtgccatgtgtcaaattctttaacattttctaca
aaaaaagttcaaaattcttatctgtttcagttttaccactgtttattgcagggttttttc
aatgaagatcaattaaaagccttgaatagtcacaggcagatggtcaatgataaaaggaga
gcccagatagaggcagcattcaggaaagctgtggaatctgctgagcaagagaaaaacagc
tcctgcagaagggatgtatccaacataatcaaactacgaattgtagattatgggacaaaa
gaaaactcaaaagaagttatactgaacatctggcgtccaccctcacatgtttgtagcctc
ttaaaggaaggaggacgatatagaattttacagttatctgcatctcactccaaaggcaag
ttgaaaaccagcaatgtacagttaacagctaccaagaaaacccagtatctacaactgcca
gtttctcaagaaagtctattacaagtttacagaccaagggaatgtctgctatatggtaaa
ctaatggagccctccttccgaccaccttgttctgaagtggatttggtgggatatgtagtt
tacttgacaaaaagagcaggcttttctacattggtatatttgtcagatgaacatcataat
ataatagcaatccagatatgtacagatctcaagttgtttgctattgaagatataatcatt
ccatatgcattgatctctgcaaccaatcttcagtggcgacctgaattcaaatcacaaatt
cccaccctatttgctggagagctttctgcattttcttcaaacccaaaggaaaagcatctc
caagaaatatttgaagaatttaaaaatgctattcagaacgatggctgctttagcaaagag
gcacaatgcaaagtcatgaattttctaaaatcagatcccttgcatttacttaatttttcc
aaagaatgtggtttggatcctccctggaaatgcgatgcaggaaataaacaagcaattaca
attcccaacagtgaactaagacatcaaagtcctttgaccattggaaagttagacataaaa
ccatccttttctcttggatctgcaaaagtgacaccagattttcaagaaactccaaagaac
tgtaagaaacgaaaggcaatggatctgctcagtcgagtcccttcccctccacctgtgaag
ccaatctgcatatttatttcaccacctctaaaaaaagcatttcagcctcctcgaagcagt
tgtggccagagcaaaacatcaattaaaaaaactgaaagaaagaatagcaaacatccgctg
ctaaagttaaatggggctgattatgctcctgaaaccaattttgttgctgatgaagaactt
gcaatgataaatacccaagacctcttaagtaatttttcagaacaaggaattgtatctatg
ggtgacactgaacatgtgatatccaatacatga
DBGET
integrated database retrieval system
