Thamnophis sirtalis (common garter snake): 106550316
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Entry
106550316 CDS
T06107
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04814
Motor proteins
tsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106550316
09142 Cell motility
04814 Motor proteins
106550316
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106550316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550316
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106550316
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106550316
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106550316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Dynein_IC2
WDR55
WD40
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_SPT8
Rrn6_K-rich
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
106550316
NCBI-ProteinID:
XP_013923682
UniProt:
A0A6I9YHM2
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKDAVPAQDESDLEKKRREAE
ALLQSMGLTPDTPMAVQPLRLVTADTCLFHYLVPPPMSPSSKSVSTPSEAGSQDSGDGAV
GSRTLHWDTDPSVLQLHSDSDLGRGPIKLAMSKITQVDFPPREMVTYTKETQTPVMTQPK
EDEEDEDDVVIQKPPVEPEEESILKKEEEEEVAPHELTEEEKQQILHSEEFLSFFDQSTR
IVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQY
PELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGG
TYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWS
LDMLSQPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEM
FEGHQGPITGIHCHAAVGPVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVM
WSPTHPALFACVDGMGRLDLWNLNNDTEVPTASITVDGNPALNHVRWTNSGREIAVGDSE
GQIVIYDVGEQIAVPRSDEWTRFGRTLAEINANRADAEEEAATRIPS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaagtgaactgaaggcagagttagaacgtaagaaacaacgcttggctcaa
ataagggaggagaaaaaaagaaaagaagaagaaagaaagaaaaaggaaactgatcagaag
aaagatgccgttcctgcacaagatgagtctgaccttgagaaaaagagacgggaagcagaa
gctttgcttcagagcatgggtttaacacctgatactcccatggctgtgcaacctctacga
ctagtaacagcggatacctgtctgtttcactatttagtccctcctcctatgtctccatct
tcgaaatctgtgagcacaccaagtgaggccggaagccaggattctggtgatggtgctgtt
ggttcaaggacgctgcattgggatactgatccatctgttctacagctccactctgattcc
gatctgggacgtggacctattaaacttgcaatgtccaaaattactcaagttgactttcct
cctcgagaaatggtcacatatacaaaggagacccaaactccagttatgactcagcctaaa
gaagacgaggaagatgaagatgatgtagttatacaaaaaccaccagttgaacctgaggaa
gaaagcattttgaaaaaggaagaagaggaagaagttgcccctcatgaactaacagaagaa
gaaaagcaacaaattttgcattctgaagagtttttgagcttctttgatcagtctacaaga
attgtagaaagagctctttctgagcaaattaatattttctttgactacagtggccgggac
ttagaagacaaagaaggagaaattcaggcaggagctaaactatccttaaacagacagttt
tttgatgaacgttggtcaaagcatcgtgttgttagttgcttggactggtcatctcagtac
ccagaattgttagtagcatcttacaacaacaatgaagatgctcctcatgagcctgatgga
gtggcccttgtctggaatatgaaatataagaaaacaactccagaatatgtctttcactgc
cagtcagctgttatgtctgctacatttgcaaaatttcatccaaatttggtggttggtggc
acatactctggacaaattgtgctctgggataaccgtagcaataagcgaacaccagttcag
agaactcccctttcagctgctgctcacacgcatcctgtatattgtgtaaatgttgtgggg
acacagaatgctcataaccttatcagcatttctactgatgggaagatttgctcatggagc
ctggatatgctatcacagccgcaggatagcatggagttagttcataagcaatccaaagct
gttgctgtcacttctatgtctttccctgttggagatgtcaacaactttgtcgttggaagt
gaagagggctctgtctacacagcatgtcgccatggcagcaaagctggaatcagtgagatg
tttgaaggccaccaagggcccattacaggtatccattgccatgcagcagttggacctgta
gacttttcacatctatttgtaacctcttcttttgactggactgtaaagctttggacaact
aagaacaacaaacctctatattcctttgaagacaactcagattatgtttatgatgtgatg
tggtcacccactcaccctgccctctttgcttgcgtagatggaatgggaagacttgatcta
tggaatctcaacaatgatactgaggtaccaacagcaagcattaccgtagatggaaatcca
gcccttaatcatgtaagatggacaaattcaggacgtgagattgctgtgggagattccgaa
ggacaaatagtaatttatgatgtgggagagcaaattgctgttccccgaagtgatgagtgg
acccgttttggtcggacgttagctgaaattaatgcaaacagagctgacgcagaagaggaa
gcggcaactcgaattccttcttaa
DBGET
integrated database retrieval system
