Thamnophis sirtalis (common garter snake): 106550346
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Entry
106550346 CDS
T06107
Symbol
CLDN20
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03272
Virion - Hepatitis viruses
tsr04382
Cornified envelope formation
tsr04514
Cell adhesion molecule (CAM) interaction
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106550346 (CLDN20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106550346 (CLDN20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106550346 (CLDN20)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106550346 (CLDN20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106550346 (CLDN20)
04147 Exosome [BR:
tsr04147
]
106550346 (CLDN20)
Cilium and associated proteins [BR:
tsr03037
]
Other cilia and associated proteins
Stereociliary proteins
106550346 (CLDN20)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
106550346 (CLDN20)
Exosomal proteins of colorectal cancer cells
106550346 (CLDN20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
TMEM37
DUF981
DUF8123
YhzF
Motif
Other DBs
NCBI-GeneID:
106550346
NCBI-ProteinID:
XP_013923718
UniProt:
A0A6I9YHB4
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MASAALQFFAFVLALFGVFGAIAATLLPNWKVNADTGSNIITAITQMQGLWMDCTWYSTG
MFSCTLKYSILSLPVYIQAARTTMILSCILSIFGICIATVGMKCTLLGGDRETKNHTSVA
GGVFFILAGISGLIPTAWYTKEIISKFLDPTIPESSKHEPGGAVYVGFISAGLLLAAGAI
FGTSCFKKQQRAGIYPNKQQNLHPASRQVDTGYSLKDYV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggccgctctccagttttttgctttcgtcctagccttgtttggtgtttttggc
gcgatcgcagccaccctgttgcccaactggaaggtgaatgcagacacgggctcaaacata
atcacggccatcactcagatgcaagggctctggatggattgcacatggtacagcaccggg
atgttcagctgcacgctgaaatattcaatcctgtctctccctgtttacatccaggcagca
aggaccaccatgattctgtcctgcatcctctccatttttgggatctgcatcgccacagtg
gggatgaagtgcacccttctgggaggggacagagagaccaaaaaccacacatcagttgcc
ggaggagtcttctttattttggcaggaatatctggcttgataccaacagcctggtacaca
aaagagatcatttcaaaatttctggacccaactattccagaaagcagtaagcatgaacca
ggaggagcagtttatgttggatttatttcggctggacttctgcttgctgcaggtgccatc
tttggcacttcctgttttaaaaaacagcagagagcagggatttatcctaacaagcagcag
aacctgcatccagcttcccggcaagtggacacaggctacagcctgaaggactatgtgtaa
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integrated database retrieval system
