Thamnophis sirtalis (common garter snake): 106550347
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Entry
106550347 CDS
T06107
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106550347 (TFIP11)
Spliceosome [BR:
tsr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106550347 (TFIP11)
Other components
Complex C specific factors
106550347 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
106550347
NCBI-ProteinID:
XP_013923719
UniProt:
A0A6I9YIE9
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MSLSYLYGRGGGEAAEAEEEGVEMERFEISEWDLQNEFNPNRHRHRQTKEEAIYGLWAER
DSDEERPSFGGKRSRDYSAPVXXXXXXXXXPPSLPPSLPRAHPPPPLQGGNFRPSQKGFL
GGSKSFTDIGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKAAIGAY
GSERTTQSLQDFPIADSDEEEEEEFQKELSQWRKDPSGGKRKPKYTYKTVEELKAKGRAG
KQLSAPQKELAQVKVIDMTGREQKVYYSYSQISQKHNIPEDGPQQQQPPALGKDARAPAF
SLPELEHNLQLLIDLTEQEIIQNDRQLQYERDMVVNLSHEIEKAEKVLLQEETDIRNLSE
VLQLVEECERRMQPSCEDPLTLPECVKVFETLQDKYYEEYQMSDRVDLAVAIVFPLVKDY
FKNWDPLKDCTAGTEILAKWKALLENDRLLSHSAQDLGSDAFHRLMWETWMPYVRNIVAQ
WQPRHCILIVDFLDSWRHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWIHPW
LPLMQARLEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNIVPK
LGLCLNELIINPHQQHMDAFFWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNNPN
YEEITKWYLGWKSMFSDQVLAHPSIKEKFNEALDIMNRAVSSSVGGYMQPGARENIAYLT
HTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMPVIGKR
HEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctcgtacctctacgggcgcggcggcggggaggcggcggaggcggaggaggag
ggcgtggagatggagcgcttcgagatcagcgagtgggacctgcagaacgagttcaacccc
aaccggcaccggcaccggcagaccaaggaggaggccatctacggcctctgggccgagcgc
gactcggacgaggagaggcccagcttcggcgggaagcggtcccgggactactcggccccc
gtnnnnnnnnnnnnnnnnnnnnnnnnnnnccctccctccctccctccctccctcccccgg
gctcaccctccccctcccctgcagggcggcaacttcaggcccagccagaagggcttcctg
ggcggcagcaagtccttcactgacatcggcagctgggagaggcacaccaagggcatcggg
cagaagctcctgcagaagatgggctacgtgcccggccgaggcctggggaagaacgcccaa
ggtatcatcaaccccattgaggccaagcagaggaaaggaaaggcagccattggggcatac
ggctcggagcgaaccacacagtccttgcaagatttccccattgccgactctgatgaagag
gaggaagaggaattccaaaaggaactcagccagtggcggaaggaccccagcgggggcaag
agaaagcccaagtacacctacaagacagtggaggagctgaaagccaagggcagggcgggc
aagcagctgtctgcccctcagaaggagctggcgcaggtcaaggtgattgacatgacgggc
cgggagcagaaggtctactacagctacagtcagatcagccagaagcacaacatcccggag
gatggtccccagcagcagcagccgcccgccttgggcaaggacgccagggcgcccgccttc
tccctgccggagctggagcacaacctgcagctgctgatcgacctgacggagcaggagatc
atccagaacgaccggcagctgcagtacgagcgggacatggtggtcaacctgagtcacgag
atcgagaaggcggagaaggtgcttctgcaggaggagaccgacatccgtaacctcagcgag
gtgctgcagctggtggaagagtgcgagcggcggatgcagcccagctgtgaggaccccctg
actctgcccgagtgcgtcaaggtatttgagaccctccaggacaagtactacgaggagtac
cagatgtcggaccgcgtggacctggccgtggccatcgtcttccctctggtcaaggactac
ttcaagaactgggaccccctcaaggactgcacagccggcacggagatcctggccaaatgg
aaagccttgctggagaacgaccggttgctctcccacagcgcacaggatctcggctcagat
gccttccacaggttgatgtgggaaacgtggatgccgtacgtgcgaaacattgtggcccag
tggcagccccgccactgcatcctgatcgtggacttcctggacagttggaggcacatcatc
ccagtgtggatcctggacaacatccttgaccagctgatcttccccaaactgcagaaggag
gtggagaactggaaccctctgaccgacaccgtccccatccactcgtggattcacccctgg
ctgcccctgatgcaggcccgcctcgaacccctttactcgcccatccgcagcaaactgtcc
agcgccctccagaagtggcaccccagcgactcctcggccaagctgatcctgcagccctgg
aaggaggttttcactccaggctcctgggaggccttcatggtcaagaacattgtgcccaaa
ctgggcctgtgtctcaatgagctgatcatcaatccgcaccagcagcacatggacgccttc
ttctgggtgatggattgggaagggatgatctccgtctccagcctggtggggcttctggag
aaacacttcttccccaagtggctgcaggtgctctgttcctggctcagcaacaaccccaat
tacgaggagatcaccaagtggtacctgggctggaagtccatgttttccgaccaggtcctc
gcccacccctccatcaaggagaagttcaacgaagccctggacatcatgaacagagccgtc
tcctccagcgtcgggggctacatgcagcccggtgcgcgggagaacatcgcctacctgacg
catacagagcgccggaaggacttccagtacgaagccatgcaggagcgccgagaagccgag
aacatggcccagcgcgggattggcatggcagccagttctgtgcccatgaacttcaaggac
ctgatccagaccaaagcagaggagcacaacatcgtcttcatgcccgtcatcgggaagcgg
cacgaggggaagcagctctacactttcgggcgcatcgtcatctacatcgaccggggggtg
gtcttcgtgcagggcgagaagacctgggtgcccacgtctctgcagagcctcatcgacatg
gccaagtga
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integrated database retrieval system
