Thamnophis sirtalis (common garter snake): 106550380
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Entry
106550380 CDS
T06107
Name
(RefSeq) uncharacterized protein LOC106550380
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106550380
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550380
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106550380
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106550380
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106550380
UBL E3 ligases
106550380
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106550380
Cilium and associated proteins [BR:
tsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106550380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP143
SNF2-rel_dom
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Baculo_IE-1
Prok-RING_4
ResIII
zf-RING_6
zf-RING_11
zf-RING_4
zf-RING_10
FUR
Motif
Other DBs
NCBI-GeneID:
106550380
NCBI-ProteinID:
XP_013923756
UniProt:
A0A6I9YHU1
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MEADSQEEPRGIPAETAPCPAERPPEPEADRQAAETHPVELPPCHGVPGPYLGELPAADL
EPPLPCVPEAPREPPARGQCLMHNWQEERATNDLDHVPRPEYGTEGFFYRHGHPGLLTLD
FLAGIPTTTTMKDSYPRPVKTGLPVREDEEEEGETEDSNENDGEVGETLSSDEEETWDDE
VQESTSSSLEHILDDFFLPFGSSDGELIMRHLQKKHKPRIGFRSSRKSSLVKTMQQNGGK
NSKCDICSTTIQDPTYLNPCNHQFCFKCIQKWSRKQVICPLCKQRFYSFCHTIRRKDAFC
EYVLPLNAGSFSPSESKEDCASASSQRLTSIPDNGIVHNEIRGTLTQREKDIYKLMRQFA
VTERPNDIDLISLGKFKAQAVIQFRRTLYQAGILVQNAPNPDFNQISSAEFFGRNPQCLD
RVIPWLKRELKVLFGNKRSTIQTFQNLILSNMIHHDLDSKEFETILQPHLHHFTGHFLHE
FMSFVQSSLNLKKYDWCALYECPAIWKETDHLTSSPSSENEHLQPPEKSQVPKPNDSLDY
GNLTFLLPGSEKAPPSTFAAADNKNHSTIEENYMDLSNKDTEKGIATAYRIFKSILLKTS
SEEKVQVPESLSHSHLFQGQKEKRDIVEIDPVQILRPTDVETAKSTMSCLYHIVLEWTSK
GILGELRDWPFIKSDDGFSRPFSDHRSFSQCQSYLEALQSQYFGQNCILADEMGLGKTIQ
SIAFLEEVYNMGIRGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASTFGGVKLVES
FFDDIF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacagccaggaggagccccgcgggatcccggcggagacggccccctgtcct
gcggagaggccgccggagcccgaggcagaccggcaagccgcagagacgcacccggtggag
ctgccgccctgccatggcgtgcccgggccgtacctgggggagctgccggccgccgatctg
gagccgcccctgccctgcgtcccggaggcgccgagggagccgcccgcccgcggccagtgt
ctaatgcacaactggcaggaagagagagccaccaatgatctggaccatgtgccgagaccc
gagtatggcaccgagggctttttctaccggcatgggcatcctggcctccttacccttgac
ttcctggccggcatccccacgaccaccacgatgaaggactcctatcctcgccccgtgaaa
acggggctccctgtgcgagaagatgaggaggaggaaggagaaacagaagactccaatgag
aatgatggggaagttggagaaacattgtcaagcgatgaagaagaaacttgggatgatgaa
gtccaggaatcaactagttccagtttagaacatattctggatgatttttttcttcctttt
ggatcttctgatggggaacttatcatgagacacttacagaagaaacataagccaaggatt
ggcttcagatcctcaagaaagagttctttagtgaaaacaatgcaacaaaatggaggcaaa
aattcaaaatgcgacatctgttcaacaacgatccaagacccaacttacttgaacccttgc
aaccaccagttctgcttcaaatgtattcagaagtggtccagaaagcaagttatatgtcca
ttgtgtaagcagcgtttctattcattctgtcacactatacgcagaaaagatgccttttgc
gaatatgtcctgcctttgaatgctggctctttttctccttctgaaagcaaggaagactgt
gcatcagcctcctctcaaagacttacatcaattcctgacaatggaatcgtacataatgaa
attaggggaacattaactcaaagagagaaggatatttataagctcatgagacagtttgca
gttacagagcgacccaatgatattgacttaatcagccttgggaaatttaaagcccaagca
gtaattcagtttaggagaactctttaccaggcagggattctagttcaaaatgctccaaat
ccagatttcaatcaaatatcttcagcagaattttttggcagaaatcctcaatgtttggac
agagtgatcccttggctaaaacgagaattaaaagtgctgtttggtaacaagagatcaacg
attcaaacttttcagaatctcatcctaagtaacatgattcatcatgatctggacagcaaa
gaatttgaaactattttacagccccacttgcaccatttcactggtcatttcctgcatgag
ttcatgagttttgttcaatcctcattaaatctgaagaagtatgactggtgtgccttgtac
gaatgccctgcgatatggaaagagactgatcatttaacttcttctccatcttcagaaaat
gaacatttgcaaccccctgaaaaaagtcaggtgcccaaacctaatgatagtttagattat
ggaaacctaacattcttgcttcctggttcagagaaagcccccccttccacatttgctgca
gcggataataaaaatcattcaacgattgaagaaaattatatggatttgtccaacaaagat
actgaaaaggggatagctacagcctatcgtatttttaaaagtatactgcttaagacatct
tcagaggaaaaagtacaggtccctgaatctctttctcactcccacctatttcaaggacag
aaagaaaaaagggacatagtagaaatagatcctgttcagattcttaggccaacggatgtg
gaaacagctaagtccaccatgagctgtctttatcacattgttttggaatggacctccaaa
gggattcttggagaacttagagactggccgtttatcaagtcggatgatgggttcagccgg
cccttttctgatcatcgcagcttttcacaatgtcagtcctacttggaagcccttcaaagc
cagtatttcgggcaaaactgcattctggctgacgaaatgggattgggcaaaaccatccaa
tccatcgctttcttggaggaagtatataacatgggaatccgtgggcccttcctggtcatc
gcccctctgtccaccatcaccaactgggagcgggaattcaacacctggaccgagatgaac
accattgtgtaccatgggagcttagcctccacatttggtggagttaagctggtagaatca
ttctttgatgatatcttctga
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