Thamnophis sirtalis (common garter snake): 106550464
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Entry
106550464 CDS
T06107
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03030
DNA replication
tsr03410
Base excision repair
tsr03420
Nucleotide excision repair
tsr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106550464 (RFC4)
03410 Base excision repair
106550464 (RFC4)
03420 Nucleotide excision repair
106550464 (RFC4)
03430 Mismatch repair
106550464 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsr03032
]
106550464 (RFC4)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550464 (RFC4)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106550464 (RFC4)
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106550464 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
106550464 (RFC4)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106550464 (RFC4)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106550464 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
106550464 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_16
AAA_30
AAA_11
Mg_chelatase
AAA_24
DUF815
AAA_19
Cdc6_lid
SLFN-g3_helicase
AAA_14
DNAX_ATPase_lid
TIP49_C
RuvB_N
AAA_5
AAA_28
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
106550464
NCBI-ProteinID:
XP_013923862
UniProt:
A0A6I9YI37
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MQAFLKGPVSAKPPSTKERGAAATAGSSGESKKPRPVPWVEKYRPKCMDEVAFQEEVVAV
LKKSLQGVDLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIRE
KVKTFAQLTVSGNRSDGKPCPPFKIIILDEADSMTSAAQAALRRTMEKESKTTRFCLICN
YISRIIEPITSRCSKFRFKPLSDKIQRQRLLNIVEKENVMISNEGIDYLVHVAEGDLRKA
ITLLQSATRLTGGKEVTEKIVIEIAGVVPKEILDGLLSACQSGSFEKLEVVMKNVISEGY
AATQLINQLHDIIVDKEDLNDKQKSVIVEKLAEADKCLADGSDEFLQLISVCAVMMQQII
QNS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctgaaaggtccagtcagtgctaaacctccctctactaaagaacgggga
gctgctgcaactgcaggaagcagtggggagagcaagaaacccagacccgttccttgggtc
gaaaaataccgtccaaaatgcatggatgaagttgcatttcaagaggaagttgtggcagta
ctgaagaaatccttacagggagttgatcttcccaacctcttgttctatggccctcctgga
actgggaaaacatctactattttggcagcagctagagaactctttggtcctgaattgttc
cggcagagagtccttgaattaaatgcatctgatgaacgtggaatacaagtcattcgagag
aaagtcaagacttttgcccaattaacagtatcaggaaatcgttcagacggcaaaccatgt
ccgccttttaagatcataatcctggatgaggcagattctatgacctcggcagctcaagcg
gctttaaggcgcaccatggagaaggaatctaagaccacacgattctgccttatctgtaat
tacatcagccgaatcattgaaccgattacatctcgatgttccaaatttcgtttcaagcca
ctttccgacaaaatccaacgtcagagacttctaaacattgttgaaaaagaaaatgtgatg
atcagcaatgagggaatcgattaccttgttcatgtggcagaaggagatttgaggaaagca
atcacacttcttcagagcgctacacgactgacagggggaaaagaagtgacagagaaaatt
gtcattgaaattgcaggggttgtccccaaagaaatattggatgggctgctgagtgcctgc
caaagtggctcttttgaaaagctggaagttgtaatgaagaatgtgatcagtgaaggctat
gcagctactcaactgataaatcagcttcatgatatcatcgttgacaaagaagacctcaat
gacaagcaaaaatctgtaattgtagagaaattagctgaagcagacaagtgcttggcagac
ggctccgatgagttcttgcagttgatcagcgtctgtgcagtcatgatgcagcaaataatt
cagaatagctaa
DBGET
integrated database retrieval system
