Thamnophis sirtalis (common garter snake): 106550500
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Entry
106550500 CDS
T06107
Symbol
PEX5
Name
(RefSeq) peroxisomal biogenesis factor 5
KO
K13342
peroxin-5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106550500 (PEX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106550500 (PEX5)
Membrane trafficking [BR:
tsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106550500 (PEX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_16
TPR_11
TPR_12
TPR_17
TPR_19
TPR_14
TPR_20
CFAP70_mid_TPR
CFAP70_TPR_C
RMD1-3
TPR_10
TPR_CcmH_CycH
ANAPC3
TPR_Slam
TPR_9
CABIN1_N
PEX18_PEX21_C
HMP
DUF7017
Motif
Other DBs
NCBI-GeneID:
106550500
NCBI-ProteinID:
XP_013923908
UniProt:
A0A6I9YHT3
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MAMRELVEPECGGSNPLMKLASHFTQDKGLQQEGLQGSLVWPPTGPVADVVPKPLGRATE
DDLVAEFLQEQNGPMLSRGPQTFKMDDLLAEMQEIEQSNFRQAPQRAPGVAALALSENWA
QDFLGASDNAVDVSGADDDDADWSQEFIAEVTDPLSVSPAKWAEEYLEQSEEKLWLGESE
DQTSADKWYEEYQPEDDLKKTANDFLAKVDDPKLNNSEFLKFVRQIGDGRVSIEANRVTI
NPRDQDKAEQWATEFIQQQDTSEAWVDQFAHTGNALEPDSEFEQAKTAVESDVDFWDKLQ
AEWEEMAKRDAEAHPWLSDYEDFASSTYDKGYQFEEDNPVRDHPHPFEEGLKCLEEGHLP
NAVLFFEAAVQQKPDHMEAPTVDCPPITCSAFVLGKLSEQFQQFSGLDLGGCLELQPGNL
TALMALAVSFTNESLQKQACETLRDWLYHKPAYAHLMGKEPEGEKSSPGLGSSKRVLGSL
LTDSLFHEVKELFLAAVRSNTDVVDPDVQCGLGVLFNLSGEYEKAVDCFTAALSSRPNDH
LLWNKLGATLANGNRSEEAVAAYRQALELQPGYIRSRYNLGISCINLGAHREAIEHFLEA
LQMQQKSRGPRGQQGAMSDNIWSTLRMALSMMGHSNLYQAADAHDLPTLLQAFALQQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgagggagttggtggagccagagtgtgggggctctaatcctttgatgaagcta
gctagccacttcactcaggacaagggcctgcaacaagaaggactccagggctccctagtg
tggcctcccactggcccagtagcagatgtggtgcccaaacctcttggaagagccacggaa
gatgatctggtggcagagttccttcaagagcagaatggccccatgctctcccgcggccca
caaacattcaagatggatgatctgttggctgagatgcaggaaattgagcaatctaatttc
cgacaggccccacagagagctccaggagtggcagcgctggctctctcggagaactgggcc
caggacttccttggtgcatctgataatgcagttgatgtttccggcgcagatgatgatgat
gccgattggtctcaggagttcattgccgaggttacagatccattatccgtatctcctgcc
aaatgggcagaagagtatttggagcagtcagaggagaagctgtggctgggtgaatcagaa
gatcagacctcggctgataaatggtatgaggaatatcagcctgaagacgatctgaaaaaa
acagctaatgattttcttgcaaaagtggatgatcccaaactgaataattctgagttccta
aaatttgttcgccagattggagatgggagggtatccatcgaggccaatcgggtgaccatt
aatcccagggaccaggataaggcagagcaatgggcaactgagtttattcagcagcaggat
acatctgaagcctgggtagatcagtttgcacacactgggaatgcgctggagccagattca
gaatttgagcaggccaagactgccgtggagtcagatgtggatttttgggacaaattgcag
gctgagtgggaagagatggccaagcgagacgcagaggctcatccttggctatcagattat
gaggattttgccagctccacttacgacaagggataccagtttgaagaagataaccctgta
cgggaccacccacacccttttgaggaggggctgaaatgtctggaggaggggcatctcccc
aacgctgtcttattctttgaagctgctgtgcaacaaaagcctgaccatatggaggctccc
acagttgattgtccaccaattacctgcagtgcttttgttttgggaaaactgtctgagcag
tttcaacaattctcaggacttgaccttggtgggtgcctggagttgcagcccggaaacctc
actgcactcatggctttagctgtcagtttcaccaatgaatcgctgcagaagcaggcatgt
gaaaccttgcgcgactggctgtaccacaaaccggcctacgctcatctgatgggaaaagaa
cccgaaggggagaaatctagcccaggtctgggctcctccaaacgtgttctgggttccctc
ctaactgactcactttttcatgaggtgaaggaattgttcttggcagctgtccgtagcaac
accgatgtggtggaccctgatgtgcaatgcggtctgggtgttctcttcaacctgagtggc
gagtatgagaaggctgtggattgcttcactgctgccctgagctcacggccaaatgatcat
ctcctttggaacaagttgggagccaccttagccaacgggaaccggagtgaggaagctgta
gctgcttaccggcaggcgctggaactgcagccgggctatatacgttctcgttacaaccta
ggcattagttgtatcaatttaggagcccatagagaggctatagaacacttcttggaagcc
ttgcagatgcagcagaagagtcgcgggccacggggccaacagggagccatgtctgacaac
atctggagcaccctccgtatggccctctccatgatgggccacagcaacctctatcaagca
gcagatgcccacgaccttcctaccctcctacaggcttttgctcttcagcagtga
DBGET
integrated database retrieval system
