Thamnophis sirtalis (common garter snake): 106550524
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Entry
106550524 CDS
T06107
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106550524 (UBE4B)
04120 Ubiquitin mediated proteolysis
106550524 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106550524 (UBE4B)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106550524 (UBE4B)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
U-box type E3
106550524 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
106550524
NCBI-ProteinID:
XP_013923930
UniProt:
A0A6I9YJH2
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGQPVPAPPLGAPHNLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSLSQV
DVDSGIENMEVDESDRREKRSLSDKELPSGLEISEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSEQFKQNPKDVFSDFKDLIGQVLMEVLMMSTHSREENPFASLTATSQPIAAAARSPD
RNLVLNTGSNPGTSPVFCNVGSFGSSSLSSGGGSGGASISDSCSDHFAIETCKETEMLNY
LIECFDRVGIEERKAPKMCSQPVVSQLLSNIRSQCISHAALVLQGSLTQLRSNQQQSLLV
PYMLCRNLPFGFIQELVRTTHQDEEVFKQIFIPILQGLALASKECSFDSDNFKYPLMALG
ELCEIKFGKSHPVCSLVVSLPLWLPKSLSPGMGRELQRLSYLGVFFGLSVFAEDDPRVVE
KYFSGPTITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAVVNANV
KKAQMQADDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPSYIFHPRCRIVVPADETRVKA
NLEDVSSWMVELSRDQSLFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYSV
VIQLLLRILDPAYPNIKLPLNPDVPKVFAAMPEFYVEDIAEFLFFIVQYSPQVLYEPCTQ
ELVTFLVVMLCNQDYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSVKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFKSLIMKKRLDGH
HISGLDASLKEGPIIFKVIQWKTNKGMGSCCWFLASCVVASLPHLSHAAFSLPLQELGPR
LAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQR
SYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVDEIVAKNARAEIDYSDAPDEFRDPL
MDTLMTDPVRLPSGTIMDRSVILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRD
KQNPDH
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgatgagatccgtcggaggcgccttgcccggctcgctggcgga
ccctcttcccagcccaccaccccacttacgtctccacagagggagaacccgccagggcag
ccggtcccagcgccgcctttaggggcaccccacaaccttgggctcaatgttcacagtatg
acccccgctacctctccaatcggtgcgtcaggtgttgcccatcgcagtcagagcagcgaa
ggtgtgagttcgctcagcagctcgccctccaacagcctcgaaacgcagtcccagtccctt
tcccggtcccagagcatggatatcgatagcgtctcctgtgagaaaagcttgtcccaggtc
gatgtggattcggggatcgaaaacatggaagtggatgagagtgaccggagggagaaacgg
agcctctcggataaggagcttccctcaggattggaaatctcggaggaacaagccttacag
ctggtttgtaagattttccgagtctcttggaaagaccgggatagagatgtgatcttcctg
acttccctttcagaacagttcaagcaaaaccctaaagatgtgttctcggacttcaaagac
ttgattgggcaagtgctgatggaagtcctaatgatgtccacccactcgagagaagaaaac
ccctttgccagcttgaccgccacgtcgcagcccattgcggctgctgcccgctcgccagat
agaaacttagtcctgaataccggctccaacccgggaaccagccccgtgttttgcaacgtg
ggctcctttggctccagctccttatcaagtggcggaggctctgggggggccagcatttcc
gactcgtgcagcgaccatttcgccattgagacgtgcaaggagacggagatgctaaactac
ctcattgagtgcttcgaccgagtggggattgaggaaaggaaagcgccaaagatgtgcagc
cagccggtggtgagccagcttctgagcaacatccgatcccagtgcatttctcacgcggct
ttggtgctccaaggatctctaacgcagctgaggtcaaaccaacagcagtcgttgttagtc
ccgtatatgctgtgtaggaatctccccttcggtttcatacaggaattggtgaggacgact
caccaagatgaagaagtcttcaaacagatctttatacctattttacaagggctggctctt
gcttcgaaggaatgctcctttgatagtgacaactttaaatacccccttatggctttaggg
gaactgtgcgagatcaagtttgggaaatcacatcctgtctgcagcttggtggtctctttg
cctttgtggttgccaaaatctctaagccccgggatgggccgagagctccagagactctct
taccttggggtattcttcggcctctccgtctttgctgaggatgatcctagagttgtggaa
aaatatttctctgggcctaccattactttggaaaacaccagggtcgttagccagtcattg
caacattacctggaatctgccaggcaagagttatttaagatcctgcacagtattctgctc
aacggagaaacgcgggaagctgctctcagctatatggctgccgtggtcaatgccaacgtt
aaaaaggcacaaatgcaggcggacgatcggctggtgtctacggatggctttatgctgaac
ttcctgtgggtgctgcagcagctgagcacaaaaatcaaactcgagacggtcgatccgtcc
tacatcttccaccctcggtgtcgaatcgtggtgcctgcggatgaaacgcgtgtcaaagct
aacttggaggatgtcagcagctggatggttgagctgtccagggatcagtctctcttctct
gagccaaaattcccaacggaatgtttcttcctgaccctccacgcccaccacctctccatc
ttaccaagttgccgtcgatacatccgtcgactaagagccatccgggagctgaacaggacc
gtggaggatttgaagaataacgaaagtcagtggaaagattctcctctagctaccaggcat
cgagagatgttgaagcgatgcaaaacccaactcaagaaattggtgcgatgcaaagcttgt
gcagatgccggcctgttagatgagaattttctccgaaggtgcctcaacttttacagcgtt
gtgatccagctcttgctacggattcttgatcctgcctaccctaacataaaactgccttta
aacccagatgtcccaaaagtctttgcagcgatgcctgagttttacgtggaagacattgcg
gaatttttgttttttattgtacaatactcgcctcaggtactctacgagccttgcactcag
gagctggtcaccttcttggtggtcatgctctgcaaccaggactacatccggaacccttac
ctggtggccaagctggtggaggtgatgttcatgaccaacccagccgtccagccccggact
cagaagttcttcgagatgatcgagaaccatccgctctccgtcaagttgctggttccttcc
ctgatgaagttttacacagatgtggagcacactggggccaccagcgagttctacgacaaa
tttacaatccgctatcacatcagcaccatcttcaaaagcttgtggcagaacatagctcac
cacgggaccttcatggaagagttcaagtcactcatcatgaaaaagaggctggatggacac
cacatatctgggctggatgcatctcttaaggaaggaccaataatttttaaagtgatacag
tggaaaacaaacaaggggatgggttcatgttgctggttcctggcttcttgtgttgttgct
tctctcccacacctctcccatgctgcgttttctcttccgttgcaggagcttggaccacgg
ctggccgcgatgctgaacttcaaccttcagcagctgtgcggccccaaatgccgcgatctg
aaagtcgaaaaccccgagaagtatggctttgaaccaaagaagcttctggatcaactgacg
gacatctacctgcagctggattgcgcccgttttgcaaaagcgatcgcggacgaccagagg
tcttacagcaaggagctatttgaggaggtgatttcgaagatgagaaaagccggcatcaag
tcgaccatagcgatagaaaaattcaagctgcttgcggagaaagtggatgaaattgttgcc
aagaacgcccgcgccgaaattgattacagtgatgccccggatgagttccgagatccactc
atggatactttaatgaccgacccggtccggttgccgtcgggaaccattatggatcgctcc
gtcattctgcgtcaccttctcaactcctccacggatcccttcaatcgccagacactaacg
gaaaatatgctggagccagtgcctgaactgaaagagcaaatccaagcttggatgagggac
aagcagaacccggatcactga
DBGET
integrated database retrieval system
