Thamnophis sirtalis (common garter snake): 106550786
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Entry
106550786 CDS
T06107
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550786
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106550786
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106550786
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106550786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
RTP1_C1
HEAT_DAAF5
MMS19_C
ParcG
UTP20
Cnd1
Adaptin_N
TAN
TFCD_C
INTS1_R4
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
106550786
NCBI-ProteinID:
XP_013924224
UniProt:
A0A6I9YJQ0
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MATSGCAAIRFIIRHTHVPRLIPLITSNCTSKSVAVRRRSFEFLDLLLQEWQTHSLERHA
AVLVETIKKGIHDADAEARVEARKTYLGLRNHFPGEAEVLYNSLEPSYQRSLQTYLKNSG
SIASLPQSDRSSSSSQESLNRPFSSKWSTSSSASMANRVSSGSKAEPTLGTLQRSCSDID
VNAAAGAKARHAISQPSGTGHLATAGLPPGSYASLEDTSDKMEGTASEDGRVRTKFSTPS
IGVGNSKADSRGRSRTKVVSQSQPGSRSGSPGRVLTTTTLSTMNTGIQRMLVSSATAQKR
SKIPRSQGCSREASPSRLSVARGSRIPRPSVSQGCSREASRESSRDTSPVRSFAPLASRH
HSRSTGALYSPDVYGATGFGISQSSRLSSSVSAMRVLNTGSDVEEAVADALLLGDIRTKK
KPVRRRYESYGIYSDDDANSDASSACSERSYSSRNGTIPTYMRQTEDVAEVLNRCASSNW
SERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIQVHK
EDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFSILMRFTVDQTQT
PSLKVKVAILKYIETLAQQMDPGDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLIS
LFELNTPEFTMLLGALPKTFQDGATKLLHSHLRNTGNGGQGPMGSPLTRPVPRSPASWSS
PITSPTNTSQNTLSPSAFDYDSENMNSEDIYSSLRGVTEAIQNFSFRSQEDMNEPMKRDS
KKEDSDSICSGSGIVDLRTGTGVTDTGRTVLDNKTSLLNTMPLHSSPRSRDYNPYNYSDS
VGSFNKSALKEAMFDDDADQFPDEPSLDHSDLVAELLKELSNHNERAEERKAALYELMKL
TQEESFGVWDEHFKTILLLLLETLGDKEHTVRALALKVLREILRHQPARFRNYAELTIMK
TLEAHKDPHKEVVRSAEEAATMLATSISPDQCIKVLCPIIQTADYPINLAAIKMQTKVTE
RVPKEILAQLLPEIVPGLIQGYDNSESSVRKACVFCLVAIHAVIGDELKPHLNQLTGSKV
SDMPYQNLILIFSNLWRFFLKCGWRWF
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggctacttctggatgtgcagccattagatttattatccgtcatacacatgtgccaaga
ctcatacctttaataaccagcaactgtacctcaaaatctgttgcagtaaggaggcgctct
tttgaatttctagacctattgttgcaagaatggcaaacccattctttggaaaggcatgca
gctgttctggttgaaactatcaagaagggcattcatgatgctgatgctgaggcaagagtg
gaagcacgaaagacttatctaggcctaagaaatcattttcctggtgaggcagaagttctg
tataatagtcttgaaccatcctatcaaagaagtctccagacttacttgaagaattctggt
agcattgcatcacttccacaatcagacaggtcatcttccagctcacaagaaagtctaaat
cgtcccttttcttcaaaatggtccacctccagttctgcaagtatggctaatagagtttca
agtggcagcaaagcagagccgaccttaggaacactgcagaggtcttgcagtgacattgat
gttaatgctgccgctggggcaaaggcacgtcatgctatcagtcagccatcaggaactggt
cacttagcaactgctggtctgcctccaggatcatatgcttccctagaggatacttctgat
aagatggaaggaacagcttctgaagatggacgtgtgcgaaccaagttttcaacaccctct
attggagtgggaaattcaaaggcagattccaggggcaggagtcgaacaaaagttgtatct
cagtctcaacctggaagccgttctggttctcctggaagagttttgactacaactacactt
tcaactatgaatacaggtattcagagaatgctagtcagctctgcaacagcacaaaaacgg
agcaagattcctcgaagccaaggatgcagcagagaagcaagtccttcaagattgtctgtt
gctcgaggtagtcgcattcctcgacctagtgtaagtcagggatgcagtcgggaagccagt
cgggaaagtagcagggatacaagccctgtccgctcttttgcaccccttgcttccaggcat
cactccagatctactggtgctctctattctccagatgtttatggagctacaggttttgga
attagtcaatcaagccgattgtcttcatcagttagtgccatgcgtgtcttaaacacaggc
tccgatgttgaagaagcagtagcagatgctttgctgttaggagacattcggacaaagaaa
aagccagttcgaaggaggtatgaatcttatggaatatactctgatgatgatgctaacagt
gatgcttccagtgcctgctcagaaagatcctatagctcacgaaatggcacaatacccacc
tacatgcgacagacagaagatgttgctgaggtccttaaccgctgtgcaagctccaactgg
tcagagagaaaagaaggtcttcttggtctacaaaatttattaaaaaatcagaggacatta
agtcgtgttgaattaaaaagattgtgtgaaatcttcaccaggatgtttgctgatcctcat
agcaagagagtgttcagcatgtttttggaaactttagtagattttattcaagttcataaa
gaagatctacaggattggctttttgtgctgctgacccagcttctgaaaaaaatgggtgct
gacttgttgggatcggtgcaagcaaaagttcagaaggctttagatgtgacaagggaatca
tttccaaatgatcttcagttcagtattttaatgcggtttactgttgatcaaactcaaaca
ccaagcctgaaggtgaaagttgcaatccttaaatacatagagacacttgcacaacagatg
gacccaggagattttgtaaattccagtgaaactcgcctggctgtatctcgaattattact
tggacaacagaacccaaaagttcagatgttaggaaggctgcacaatcagtgctgatttct
ctttttgaactcaatacccctgaatttacaatgctgttgggtgctttaccaaaaacattt
caagatggcgccacaaagttgcttcacagtcacctccggaatacaggcaatgggggacag
gggcccatgggaagcccattaacaaggcctgttccacgctcaccagctagttggtctagc
cccatcacttcaccaaccaatacatcccagaacacattatcaccaagtgcatttgattac
gattctgaaaatatgaattcagaagatatatatagttctctccgtggagtgactgaagca
attcagaactttagcttccgcagtcaggaggatatgaacgaacctatgaaacgggattca
aaaaaagaagatagtgattcaatttgcagtgggtctggaatagtagatctacgaacagga
actggtgtgactgatacaggccgaacagttcttgacaacaaaacttcattacttaacact
atgcctcttcattcctccccacggtcacgtgattataatccatacaattattctgatagt
gttggttcttttaataaatcagctttaaaagaggctatgtttgatgatgatgcagatcag
tttcctgatgaaccttccctggaccattctgatctagtcgcagaattgctaaaggaatta
tcaaaccataatgagagagctgaagaacggaaggctgctctttatgagctaatgaaattg
actcaggaggagtcttttggtgtttgggatgagcacttcaaaacaattcttcttttgtta
cttgaaactcttggagacaaagagcatacagttagagccctggcactgaaagtcttaaga
gagattttaagacatcaaccagcaaggtttagaaattatgcagaactcacaataatgaag
actttagaagctcataaggaccctcataaggaggtggtaagatcagctgaagaggctgct
actatgctggccacatctattagtccagatcaatgcatcaaagtactttgtcccatcatt
caaacagcagattatcctataaatctggctgcaatcaaaatgcagaccaaagttactgaa
agagtacctaaagaaattcttgctcaacttttgccagagatagtgccaggtttaatacag
ggctatgataactctgaaagcagtgttcgaaaggcatgtgtcttctgccttgtagctatt
catgcagtaattggtgatgagctgaagccacatcttaatcaactcactggcagcaaagta
agtgacatgccataccaaaatctgattttgattttttctaatttatggagatttttttta
aagtgtgggtggagatggttttaa
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integrated database retrieval system
