Thamnophis sirtalis (common garter snake): 106550794
Help
Entry
106550794 CDS
T06107
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like
KO
K17908
autophagy-related protein 18
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04136
Autophagy - other
tsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106550794
04136 Autophagy - other
106550794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106550794
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106550794
Membrane trafficking [BR:
tsr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
106550794
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106550794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_Vps41
VID27
BCAS3_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
106550794
NCBI-ProteinID:
XP_013924279
UniProt:
A0A6I9YJU8
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MLEQYLCCFVNQQQNDWADYLAVVEFAFNNSQHTSTQPYDNEEPSEYKVASIREFPMAEA
TVPIPDSMCYGLEDFTWENVTFVHFIIILPITFKKRLTQLVVLSLFRATPFPFHPRPADD
TEDVCIVERLFSSSLVAIVSLRAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVC
LEESLYIHNIRDMKVLHTIRETPPNPAGLCSLSINNDNCYLAYPGSASIGEVQVFDTINL
RATNMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGMKR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttggagcagtacctgtgctgttttgtgaaccagcagcaaaatgattgggcagactac
ctggcagtggtggagtttgcattcaataactcacagcatacatccacgcaaccttatgac
aacgaggagccgtctgagtacaaagttgccagtatccgggaattcccgatggctgaagcg
acggttccaatacctgattcaatgtgctatgggctggaggattttacctgggagaatgtg
accttcgtgcattttattatcattcttcccattacttttaaaaagcggctaacccagttg
gtggttctttctctgttccgtgccaccccgttccctttccaccctcgccccgcagatgac
accgaagacgtgtgcatcgtggaacggctcttctccagcagcctcgtcgccatcgtcagc
ctccgggcgcctcgcaagctgaaagtctgccacttcaagaaagggacggagatctgcaac
tacagctactccaacacgatcctggctgtcaagctgaacaggcagagattgatcgtctgc
ctggaagaatctctgtacatacataacatacgggatatgaaagttctgcacaccatcagg
gagacgcctcctaatcctgcgggattgtgttccctctccataaacaatgataactgttac
ctcgcctatccggggagcgcgagcattggcgaagtccaagttttcgacaccatcaacctg
agggctaccaacatgatccccgctcacgacagtccgctggctgccctggctttcgacgca
agcggtacgaagctcgccacggcctccgagaagggcacggtgatccgggtattttccatt
ccagaggggcagaagctcttcgaattccgacggggcatgaagaggtga
DBGET
integrated database retrieval system
