Thamnophis sirtalis (common garter snake): 106550802
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Entry
106550802 CDS
T06107
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
tsr03083
Polycomb repressive complex
tsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106550802 (RBBP4)
03083 Polycomb repressive complex
106550802 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106550802 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550802 (RBBP4)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106550802 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
106550802 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
106550802 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106550802 (RBBP4)
PRC2.2
106550802 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106550802 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106550802 (RBBP4)
Chromatin remodeling factors
NuRD complex
106550802 (RBBP4)
NuRF complex
106550802 (RBBP4)
NuRF complex (fruit fly)
106550802 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
106550802
NCBI-ProteinID:
XP_013924249
UniProt:
A0A6I9YJS2
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRRAGLPDGSAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR
PEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKI
EIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG
HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW
HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD
KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS
PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE
GSVDPEGQGS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgggccgggctgcccgatggctcagctgcctttgatgatgcagtagaggaacga
gtgatcaatgaagaatataaaatatggaaaaagaatactccctttctttacgaccttgta
atgacacatgccttagaatggcccagcttgactgctcagtggcttccagatgtaaccaga
cccgaaggcaaagatttcagtattcaccggctagttcttgggacacatacatctgatgag
caaaatcaccttgtaatagccagtgttcagctccccaatgatgatgcccagtttgatgcc
tcacattatgatagtgaaaagggagaatttggcggctttggatctgttagtggaaaaatt
gaaattgaaataaagatcaaccatgaaggagaagtgaatagagcccgttacatgcctcag
aatccttgcattattgccacaaaaactccatccagtgatgttcttgtatttgattatacc
aaacatccatctaaaccagatccttctggggagtgcaatccagatctacgtcttcggggg
catcaaaaagaaggttatggtctgtcttggaatccaaatcttagtggacatttgcttagt
gcatctgatgatcatactatttgcttgtgggacataagtgctgttccaaaggaagggaaa
gtggtggatgctaaaactatcttcactggtcatacagctgtggtggaggatgtttcctgg
catttgctccatgaatctctttttggatctgttgctgatgatcagaaactcatgatctgg
gacacccgttcaaacaacacttcgaaaccaagccattcggtggatgctcacactgctgaa
gtgaactgcctgtctttcaatccttacagcgagttcatcctggctacaggatcagctgat
aagactgttgcattgtgggatctgagaaacttgaaactaaagctgcattcctttgagtca
cataaagatgaaatatttcaggttcagtggtcaccacataatgaaactattttggcctcc
agtggtactgatcgccgactaaatgtctgggatttgagtaaaattggagaagagcaatct
cccgaggatgcagaagatggtccacctgaattgctgttcattcacgggggtcacactgca
aagatatctgacttctcctggaatcccaatgaaccctgggtaatttgttctgtatcagaa
gacaatataatgcaagtgtggcaaatggctgagaacatatataatgatgaagatcctgaa
ggaagtgtggatccagaaggacaaggatcctag
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integrated database retrieval system
