Thamnophis sirtalis (common garter snake): 106550809
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Entry
106550809 CDS
T06107
Symbol
UBR5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106550809 (UBR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106550809 (UBR5)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106550809 (UBR5)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
HECT type E3
106550809 (UBR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
106550809
NCBI-ProteinID:
XP_013924260
UniProt:
A0A6I9YKI2
LinkDB
All DBs
Position
Unknown
AA seq
2818 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLNSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRVCRIGFLVQPDRLELGKPDNNDGSKLSSGSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLSSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPNLDKKNTPVQSPVSLGEDL
QWWPDKDGMKFISIGALYSELVAVSSKGELYQWKWSESEPYRNTQNPSIHHPRAGSLGLT
NEKIILLSANSIRATVATENNKVATWVDETLSSVASKLEHTAQTYSELQGERIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSMPNITVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKNMEKANKTTETKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEEQWSLREVVFVE
DVKNVPVGKVLKVDGAYVAVKFPGTSTTANCASSTGLDPDPSSLLQDCRLLRIDELQVVK
TGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQ
ENNFPTSSLAFLGQNERSVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPP
ISSLGMGVHSLTNIPANSTIKKKAAIIIMAVEKQTLMQHILRCDYESCRQYLMNLEQAVV
LDQNPQMLQTFLGHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVE
AIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGASSSDHQDPVSPP
IAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTATTGTGQGPSTSTIPGPSTEPSVVESKD
RKANAHFILKLLCDSVVLQPYLRELLSAKDARGMTPFMSAVSGRAYPAAITILETAQKVA
KAEAMSSEKEEDVFMGMVCPTGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCG
LLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLFRLLT
TTNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANPEDSDMPDHDLE
PPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQSGTIRL
DCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAISVTMRFLRSVARVFVILS
VEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIIPVRMGIARPTAPFTLA
STSIDAMQGSEELFSVEPLPPRPSSDQSSSSSQSQSSYIIRNPQQRRISQSQPVRGRDEE
QDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENAEAEGQHDEHDEDGSDMELDLLAAA
ETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDTSDSDSSSSQ
SDDIEQETFMLDEPLERTTSSSHANGAAQAPRSMQWAVRNTQNQRTTSTAPSSTSAPAAS
SAGLIYIDPSNLRRSGTISTSAAAAAAALEASNASSYLTSASSLARAYSIVIRQISDLMG
LIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEDKLIPTWNWMVSIMDSTEAQLRYGSALA
SAGDPGHPNHPLHASQNSTRRERMTAREEASLRTLEGRRRATLLSARQGMMSARGDFLNY
ALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTREL
LELGLDNEDSEHENDDDTNQSTTLNDKDEDSLPAETGQNHPFFRRSDSMTFLGCIPPNPF
EVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSANSGKCLLEVTVDRNCLEVLPT
KMSYAANLKNVMSMQYRQKKEEEQNVPSEESEGSKPGPSAHDLAAQLKSSLLAEIGLTES
EGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVK
ESKFRREMEKLRNQQSRDLTLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRVKVTF
KDEPGEGSGVARSFYTAIAQAFLSNEKLPNLDCIQNANKGTHTIGSFLLTTFGLEYFEPK
AVTGLMQRLRNRGERDREREREREMRRNSSGLRTGSRRDRDRDFRRQLSIDTRPFRPASE
GNPSDDPDPLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRA
RVDEAMELIIAHGRENGADSILDLGLLDSSDKVQENRKRHGSSRSVVDMELDDTDDGDDN
APLFYQPGKRGFYTPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGR
KVNWHDFAFFDPVMYESLRQLILASQSTDADAVFAAMDLAFAIDLCKEEGGGQVELISNG
VNIPVTPQNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNG
CGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPA
SEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8457 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgatccacttcgtggtgcacccgctgccgggcaccgaggaccagctcaatgac
aggttaagagaagtttcagaaaagcttaacaagtacaacttaaatagccatcctcctttg
aatgttttggaacaggcaacaattaaacagtgtgtagtgggaccaaatcatgctgcattt
cttcttgaggatggtagagtctgcagaattggctttttagttcagccagacagattagaa
ttgggtaaacctgataacaatgatggttcaaagttgagcagtggctcaggggcaggaagg
acatccaggccaggcaggactagtgattccccatggtttctgtctggttctgaaactctg
ggcagactggcaggcaacacccttggaagtcgatggagctctggtgtgggaggaagtggg
ggaggatcatctggtagatcatcagctggagctagagattcacgaaggcaaacacgagtt
attcgaactggacgtgacagagggtctggtctactgggtagtcaaccacaaccggtgatt
ccagcatctgttatcccagaagaactcatttcacaggcacaagttgttttacaaggaaaa
tctagaagtgtaattatcagagagcttcaacggacaaatcttgatgttaatcttgcggtg
aacaacttgttgagtcgtgatgatgaggatggtgatgatggtgatgatacagcaagtgaa
tcctaccttccaggagaggatcttatgtctcttctggatgctgacatacattctgctcac
ccaagtgtcattattgatgctgatgctatgttttcagaagatattagttactttggttat
ccatcctttcggcgctcatcactttccaggctaagctcgtcccgagttctccttcttccc
ttagagagagactctgagctgttgcgtgaacgtgagtccgttttacgtttgcgtgaacga
aggtggcttgatggagcctcatttgataatgaaagaggctctacaagcaaagaaggagag
ccaaaccttgacaagaagaatacacctgtccaaagcccagtctcattaggagaagatttg
cagtggtggccagataaggatggaatgaaatttatttctattggtgctctgtattctgaa
ttggtcgcagtgagcagtaaaggggagctctatcagtggaagtggagtgaatctgaacca
tatagaaacacacagaatccatcaatacatcatccacgtgcaggatcattgggattgaca
aatgagaagataattcttctttctgcaaatagcattagagcaactgttgctaccgaaaac
aataaggtggctacttgggtagatgaaactttgagttctgtagcttctaaattagaacat
accgcacagacctactcagaacttcaaggagaacggatagtttcactgcattgttgtgcc
ctgtatacatgtgctcagttggagaataatttatattggtggggtgtagttccttttagc
caaagaaagaagatgctggaaaaggctagagccaaaaataaaaagcccaagtctagtgct
ggtatatcttcaatgccaaatatcactgttggtactcaggtgtgtttgaggaataatcct
ctctatcatgctggtgcagtggccttttcaattagtgctggaattcctaaagttggtgta
ttaatggagtctgtttggaatatgaatgatagctgtagatttcagcttcggtcgccagaa
agtttaaagaacatggagaaagctaataaaactacagaaacaaagcctgaaagtaagcag
gaaccagtgaaaactgaaatgggcccaccgccttctccagcctctacctgcagtgatgcg
tcttcaatagcaagcagtgcatcaatgccatataaacggcgaagatctaccccagctcct
aaagaagaagagaaggtgaatgaggaacagtggtctcttagagaagttgtatttgtggaa
gatgttaaaaatgttcctgttgggaaggtattaaaagtggatggtgcttatgttgctgta
aaatttccaggaacatctactactgcaaattgtgcaagcagcactggtttagatcctgat
ccctcttctcttcttcaagattgccgattgctccgaatagatgaactacaagtggtaaaa
actggtgggacaccaaaagttccagattgttttcagagaactcctaaaaaactatgtatt
ccagaaaaaacagaaattctggcagttaatgtagattcaaaaggagtccatgctgttctc
aagactggaaattgggttagatattgcatttttgatctagcaactggaaaagcagaacag
gaaaataatttccccactagcagccttgctttccttgggcagaatgagagaagtgttgct
attttcactgctggacaggaatcaccaatcattcttagagatggaaatggcactatatat
ccaatggcaaaagattgtatgggtggaataagagatcctgattggcttgatctccctcct
atcagcagtctgggaatgggagtacattccttaacaaatattcctgctaattcaaccatt
aaaaagaaagctgctatcatcataatggctgttgagaagcaaactttaatgcaacatatt
ctgcgatgcgactatgagtcctgcagacagtatcttatgaacctcgaacaagctgttgtc
ttggatcagaacccacaaatgctacagacattccttggccatcgatgtgacggaaataga
aatattctgcatgcttgtgtgtctgtgtgctttccaaccagtaataaagaaactaaagag
gaagaagaagcagagcgctcagaaaggaatacgtttgctgaaagattatctgctgttgaa
gctattgcaaatgctatttcagtggtgtcaagtaatggaccaggaaatcgtgcaggttcc
tccagcagtagaagtttgcgactgagagaaatgatgagacgatctttgagagcagcaggt
ttgggcagacatgaagctggagcttcatcaagtgaccatcaggatcctgtttctcctccc
atagctcctccaagctgggttcctgatcctccagcaatggatcctgatggtgacattgat
tttatcctggctcctgctgtgggatctcttaccacagcaacaactggcactggccaagga
ccaagcacttctaccataccaggtccttctacagaaccttctgtagtggaatcaaaagac
aggaaggccaatgcacatttcatactgaaattgttgtgtgacagtgttgttttacagcca
tatctccgggaactcctgtcagccaaggatgcaaggggaatgacaccatttatgtctgca
gtcagtggcagagcatatcctgctgcaattactattttagaaactgcacagaaagttgca
aaagcagaggcaatgtcaagtgaaaaagaagaagatgtctttatgggaatggtttgtcca
actggcacaaatccagatgactctcctttgtatgttttgtgttgcaatgatacttgtagt
tttacatggactggtgcagaacatataaatcaggatatatttgaatgccgaacatgtggt
ttattggaatcgctgtgctgttgcacagaatgtgcacgagtgtgccataaaggccatgat
tgcaagcttaaacgcacatcacctacagcatactgtgattgttgggagaagtgcaagtgc
aaaacattaattgcaggacaaaaatctgcccgtcttgatctgcttttccggctgcttact
actacaaatcttgtcaccatgccaaatagtaggggggaacatcttctactgttcttagta
cagacagttgcgcgacaaacagtagagcactgccaataccgtccaccaagaattagagaa
gatcgtaatcgtaaaactgcaaaccctgaagattcagatatgcctgatcatgatttagaa
ccgccacgatttgcacagcttgccttggaacgtgttttacaagactggaatgccttgaaa
tcgatgatcatgtttggctcacaggagaacaaagaccctcttagtgcaagcagtaggatt
ggtcaccttttacctgaagaacaagtttaccttaatcagcagagtggtactattcggctg
gattgttttacacattgtctcattgtgaaatgtacagcagatattttgcttttagatact
ttgctggggacacttgtcaaagaattgcaaaacaagtacactccaggtcgcagagaagaa
gcaatttctgttacaatgcggtttctgcgttctgtagctagagtttttgtaattcttagt
gtggaaatggcttcctcaaaaaagaaaaacaactttattccgcagccaattggaaaatgt
aagcgtgtattccaagctttattaccttatgctgtagaggaattatgcaatgtagcagag
tccctcattatcccagttaggatgggtattgcacgtcctacagcaccttttacattggca
agcacaagtatagatgccatgcaaggcagtgaagagctgttctcagtagaacctcttcct
ccacggccatcttctgaccagtccagcagttccagtcagtcacaatcctcatatatcatt
aggaatccacagcaaaggcggatcagtcagtctcagccagttcgtggcagagatgaagaa
caagatgatattgtgtcagcagatgtggaagaggttgaagtagttgaaggagttgcagga
gaagaagatcaccatgatgaacaagaagaacatggtgaggaaaatgcagaagcagaaggc
cagcacgatgaacatgatgaagatggaagcgatatggagttggatttattggcggcagca
gaaacagagagtgacagtgaaagtaatcatagcaaccaggataatgctagtgggcgcaga
agtgttgtcactgcagctacggcaggatcagaagcaggcgctagtagcgtgccagctttt
ttttctgaggatgactctcagtcaaatgataccagtgattcagacagcagcagcagtcag
agcgatgatatagagcaagaaacttttatgctggatgagccactggagcgaacaaccagc
agctctcatgccaatggtgcagcccaggccccccgatccatgcagtgggctgtacgcaac
acccagaatcagaggaccactagcaccgcaccatctagtacctccgctccagcagccagt
tcagcaggcttaatttatattgatccatccaacctgcgtcggagcggaaccatcagtacc
agtgcagcagccgcagccgcggctcttgaggcgagcaatgctagcagctacctaacatct
gcaagcagtttggcaagggcgtacagtattgtgatacgacaaatatcagatcttatggga
ctaattcccaaatacaatcatttggtatactcccagatcccagctgcagtgaagctgaca
taccaagatgctgtgaatttacagaattacgttgaagacaaactgattcccacttggaat
tggatggtgagcattatggactccactgaagctcagctacgttatggatctgcacttgcc
tctgctggagatcctggccatccaaaccatcctcttcatgcatcacagaactcaacccgg
agagagaggatgacagcacgtgaagaagctagcctaaggactttggagggtagacggcgt
gctacattgctcagtgctcgacaggggatgatgtctgcaaggggagatttcttgaattac
gccctctccttgatgcgttcccacaatgatgagcattctgatgttcttccagtcttagat
gtctgctcattgaaacatgtagcctatgtctttcaagctctcatttattggattaaagca
atgaaccaacaaacaactttggatacgcctcagctggaacggaagaggactcgagagctt
ctggaacttggcctggacaatgaagattctgaacatgaaaatgatgatgatacgaatcaa
agtactacacttaatgataaggatgaggactcccttccagctgaaacaggccaaaatcat
ccattcttccggcgatcagattctatgacattcttgggctgtattccccctaatcctttt
gaagttcctctagcagaggccatccctctggcagaccagcctcatctgttacagccaaat
gctagaaaagaagatttgtttggtcggccaagtcaaggtctctattcatcgtctgccaat
agtgggaaatgtttattagaagtgaccgtggatagaaactgtcttgaggttcttccaacc
aagatgtcctatgcagccaatttaaaaaatgtgatgagcatgcagtatcggcagaagaaa
gaagaagaacaaaatgtgccatcagaagaatccgaaggttcaaagccggggccgtcagca
cacgatcttgcagcacaactgaaaagcagtttattggcagagattgggctaactgaaagt
gaaggacctcctctaacatccttcaggccacaatgtagcttcatgggaatggtaatttct
catgatatgctgcttggacgttggcgtctttctctagagttatttggaagagtattcatg
gaagatgtaggagcagaacctggatcgatcttgactgaattaggtggttttgaagtgaaa
gaatcaaaattccgcagagaaatggaaaagctgagaaatcagcagtctagggatttaaca
ttagaggttgatcgggatagagaccttctgattcagcaaacaatgaggcagctcaacaat
cactttggtcgaagatgtgctaccactccaatggctgtccatagggtaaaggttacattt
aaggatgaaccaggagaaggcagcggtgtggcacgaagcttttatactgctattgcacaa
gcctttttgtcaaatgagaaactgccaaatctggattgtattcaaaatgccaacaagggg
acacatacaattggaagttttctgcttacaacatttggactggagtattttgagccaaag
gcagttacaggtctaatgcagagattacggaacagaggggagagagatcgagaaagggag
cgggagagagaaatgaggagaaatagtagtgggttgcgaactggttctcgaagagacaga
gacagggatttcaggaggcagctgtccattgacaccagaccttttcgacctgcatctgaa
ggaaatcctagtgatgaccccgatcctcttccagcacatcgacaggccctgggtgaaaga
ctttatccccgtgtacaagcaatgcaacctgcatttgcaagcaagattacaggcatgcta
ttggaattgtcacctgcacagctgcttttgctattagcaagtgaagattcccttcgagca
agagtggatgaggctatggagctcatcattgcacatgggagggaaaatggagctgacagc
attctagaccttggcttgttggattcttctgataaagtacaagaaaatagaaaacgacat
ggttctagtcgtagcgttgtggacatggaattagatgatacagatgatggtgatgataat
gcaccactgttttatcaacctggaaaacgaggtttttatacaccgaggccaggcaaaaat
acagaagccagactgaattgcttcagaaatatcggcagaattctagggttgtgcttgctg
caaaatgaactatgtccgattacattaaatcgacatgtaataaaagttcttcttggcaga
aaggttaactggcatgattttgccttttttgatccggttatgtatgagagtttacggcaa
ctcatcctcgcttcccaaagcacagatgctgatgcagtttttgcagcaatggacttagct
tttgcgatagacctgtgcaaagaggaaggtggaggacaggttgaacttatttccaatggt
gtaaatattccagtcactcctcaaaatgtgtatgaatatgtccgtaaatatgcagaacat
agaatgttagtagttgcagaacaacctctacatgcaatgaggaagggtctattggatgta
ctcccaaagaattcattagaagacttgacagcagaagatttcaggcttctagtcaatgga
tgtggtgaagttaatgttcagatgctaatcagctttacttctttcaatgatgagtcagga
gaaaatgctgagaaacttctgcagtttaaacgatggttttggtccatagtagagaagatg
agtatgactgaaaggcaagatttagtctacttttggacatctagcccctcattacctgct
agtgaagaaggatttcagcctatgccatccatcacaataagaccaccagatgatcaacac
cttcctacagcaaacacatgtatatcacgcctttatgttccactttattcttctaaacag
attcttaaacagaagttactactcgccattaagaccaaaaattttggttttgtgtag
DBGET
integrated database retrieval system
