Thamnophis sirtalis (common garter snake): 106550860
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Entry
106550860 CDS
T06107
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106550860 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106550860 (RAE1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106550860 (RAE1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106550860 (RAE1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106550860 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
ANAPC4_WD40
eIF2A
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SPT8
PepSY
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
106550860
NCBI-ProteinID:
XP_013924317
UniProt:
A0A6I9YJ95
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGTTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEIQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTGSCDKTAKMWDLNSNQA
IQIAQHEAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRTPTPMMMLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttgggtcaacatcaggatttggaactggaggcaccagcatgtttggcacc
actgctacagataatcacaacccaatgaaggatattgaagttacttctccacctgatgac
agcataggttgtttggctttcagcccaccaacattgccgggtaatttccttattgcagga
tcatgggcaaatgatgttcgttgttgggaaatccaagacaacgggcaaactattccaaaa
gcccaacagatgcatacaggaccagtactagatgtttgctggagtgatgacggaagtaaa
gttttcacagggtcttgtgataaaactgccaaaatgtgggatcttaacagcaatcaagca
atacaaattgcacagcatgaagctcctgtaaagaccatccattggattaaagcaccaaat
tatagttgtgtgatgactggaagttgggataaaacattaaagttttgggatacacgaaca
cccaccccaatgatgatgctacagttgcctgaacgatgctattgtgctgatgtgatatat
cccatggctgttgttgctactgcagaaaggggcttgatagtttaccagttagagaatcag
ccttctgaatttagaaggatagactctccacttaaacatcagcatcgctgtgtggctatt
ttcaaagacaaagtgaacaaaccaacaggctttgcccttggaagtatcgaaggaagagtt
gccattcattatattaatccaccaaatcccgccaaagacaactttaccttcaaatgccat
cgatccaatggtacaaacacctctgcgcctcaggatatctatgcagtaaatgggattgcc
ttccatcctgcccacggcactcttgcaactgtggggtctgatggcagattcagtttctgg
gataaagatgcgcggacaaagctaaaaacatctgaacagctagaccagccgatatctgct
tgttgcttcaaccataatggcaacatatttgcatatgcttctagttatgactggtcaaag
ggacatgaattctataatccccaaaagaaaaactatatatttctgcgcaatgctgctgaa
gaactaaaacctagaaataaaaagtattaa
DBGET
integrated database retrieval system
