KEGG   Thamnophis sirtalis (common garter snake): 106550890
Entry
106550890         CDS       T06107                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106550890 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsr01009]
    106550890 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsr03021]
    106550890 (ELL)
Protein phosphatases and associated proteins [BR:tsr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106550890 (ELL)
Transcription machinery [BR:tsr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     106550890 (ELL)
    Little elongation complex (LEC)
     106550890 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3970 DUF6185 RNA12
Other DBs
NCBI-GeneID: 106550890
NCBI-ProteinID: XP_013924387
UniProt: A0A6I9YJG4
LinkDB
Position
Unknown
AA seq 570 aa
MAALTERGYVLSCGRLGRGTRISVFHVKLTDSALRAFEAFQGRKDSVGLKPSIQFQGSQG
HISIPRPDCPTGVRTFSFYLSNIGKDSPQGSFDCIQQYVSSNGNIQLDCLGSVQDKITVC
ATDESYQKAKQSMALVEEETRSRGAIVIKPGGRYVGKTVKMRKPAPGVSDTVPSRIRPTP
VNLASAIKKGNSAVSQRPFKDRVMHLLALKPYKKPELLLRLQKDGLSLQDKDSLDSLLQQ
ATLVCSFPRKLFQPQNPSCIPENSAPSPPRDTAHVSSSPPQKRSQPLDFIDPLANKKPRI
SHCAQRTQPTFNGKLNSANGKETALPTMVAANSVSSSSLLPTLELPRPHDPLADVSNDLN
HNGKDFEMSEPAERRTASRSAADPAQMSKHNCAPHSKSRKKKHKERERKEEQQQVHEKPN
CELKKGGSKMSPSQDSAGLNRTCNSSSVPSSTSGRPDYLLKYGAISSSEQRQSYKNDFNA
EYGEYRDLHARIERITRRFMELDSELKQLSQGSEEYKTIHDQILQEYRKIKKTNPNYSQE
KNRCEYLHNKLAHIKKLIAEYDQQQIQSWH
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggcggcgctgactgagagggggtacgtgctgtcctgcgggcgcctcggccgcggcaca
cgaatctctgtcttccacgtcaagctgaccgattcggccctgcgagcctttgaggccttc
cagggacgcaaggattctgtgggtttgaagccatcaatccagtttcaaggaagccaaggg
cacatctcaataccgagaccagactgcccaacaggagttcggacattttccttttatctc
tctaatattggcaaggacagccctcaggggagttttgattgcatccagcagtatgtgtcc
agcaatgggaacattcagctggattgccttggcagcgtccaggacaaaatcacagtctgc
gccaccgacgaatcctaccaaaaggcaaagcagagcatggccctggtggaagaggaaaca
cggagccggggtgccattgtcatcaaacctggagggcgctacgttggaaagaccgttaag
atgcgtaagcctgcaccaggggtttccgacactgttccctcacggatacgcccaacacct
gtcaacctcgccagcgccatcaagaagggcaacagtgccgtctcccagaggcctttcaaa
gatagggtgatgcacttgctggctctcaagccttataagaaaccagagctcctccttagg
ttgcaaaaagatggcctttctctgcaggataaggattccttggacagcctcttgcagcag
gcaacgttggtctgttcttttcccaggaaactcttccagccacagaatcccagctgcatc
cctgagaattctgctcccagtcctccacgggacaccgcacacgtttcctcctcccctccc
cagaagcgatcccagcccctggactttattgaccccctcgccaacaaaaagccaaggatc
tctcactgtgcccaaaggactcagcccactttcaacggcaaactcaactctgccaacgga
aaggagactgctttgcccacaatggtggcggctaattcagttagctccagctctcttttg
cccactctggagctacccaggcctcatgacccgcttgccgatgtcagcaacgatctgaac
cacaacggcaaagactttgagatgtcggagccggccgagaggcggacagcaagccggtcg
gccgcagaccctgcccagatgagcaaacacaattgtgcgccacactcaaaatccaggaag
aagaaacataaggagcgagaaaggaaggaggagcagcaacaggtccacgagaagccaaac
tgtgaactaaagaagggtggctccaaaatgagcccctcgcaagacagtgcaggtttaaac
aggacatgcaacagctccagtgttccatcttctacttcaggcaggccagactacttgcta
aaatacggtgccatctcttcctcggagcaacgtcagagctacaagaatgatttcaacgcg
gagtacggcgagtatcgtgacctgcatgctcgtattgagcggataactcgacggttcatg
gagctggattcagaactaaagcagctttctcagggctcggaagaatacaagactatccat
gatcagatcttgcaagaataccgaaaaattaaaaagactaatccaaattacagccaggaa
aaaaaccgctgtgaatatctccacaacaaactggcccatatcaaaaaactcatagctgaa
tacgaccaacagcagattcagtcttggcattga

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