Thamnophis sirtalis (common garter snake): 106551037
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Entry
106551037 CDS
T06107
Name
(RefSeq) flap endonuclease GEN homolog 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106551037
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106551037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo_2
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
106551037
NCBI-ProteinID:
XP_013924521
UniProt:
A0A6I9YK35
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MNWTEQYACEKLCSLLTYYDMNRKKCGHTDPKQLQALRIIKTRIRNGIPCFEIAWQKPDH
YSAVTEDQLANPFLITTEESTLFEAAYPEVVALYQMEKLKIGKDKKKSKKKNNVKKGLAG
DSKVEDTFSDLNLQPACENILSQDSKSDLRPVFDLQKFPKTSCESLRFSDSADFSTALGK
PRNFFFASQNPENELLVKEPMASSANTDLHLSGIDWEGTSFSISPRNVNLPWYSESDSGL
CNNSLKQCSPPYSKAAKILTQHSDSAKSNPNLITGVSKTGFPKEKNALSLKDRATMESLE
AFPKAKSVPLLNAAIQLQEQIKRTSNPGGEFSSPDSIQEIENVMLLEKHLRGLSLESYRE
DLQSYKDPPTAADKVKDSGSSLRLCTEVLKVSPLENEQQILLPRSNKVLDNCQIEGKSVP
RITKSSLKSVCQNNDPADDSDSENVEGRWKGHSISKQQRKAHTVQPKDKCNGKRDTKKLA
FKIQPEPKGKVEHALKLLNADLSTEEHLLLPLSKSVSISNYGLLLQAGMAPSGSSGYPLL
IKSQHLRDQSWHNATPNSDGDQIKRFAVKKMNWTEQYACEKLCSLLTYYDMNRKKCGHTD
PKQLQALR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaccgagcagtacgcctgtgagaaattgtgtagccttctgacttactatgac
atgaacagaaagaagtgtggccatactgatccgaagcagctgcaggccctgcggataatc
aagacacggattagaaatggaattccttgttttgaaattgcatggcaaaagccagatcat
tactccgctgtaactgaggatcagcttgcaaatccctttctaataacaacagaagagtcc
acgctctttgaggctgcctatccagaagtggttgctttgtatcaaatggagaagttgaaa
attggcaaagacaaaaagaaaagtaaaaagaaaaacaacgtgaaaaaaggcttagcagga
gacagcaaagtagaagatactttttctgacctgaatttgcaaccagcatgtgaaaacatt
ctcagccaagattcaaaatctgatttgaggcctgtttttgatttgcaaaaatttccaaaa
acgagctgcgaatctctgcgtttttcagactctgcagatttttctactgcattaggaaag
ccaagaaacttcttttttgcttcacaaaatccagaaaatgaattgcttgttaaggagcct
atggcttcttctgcaaatactgatcttcacctcagtggcattgactgggaagggacatcc
ttcagcatttccccaagaaatgttaatctaccttggtattcagaatctgactctggccta
tgcaataattctttaaagcagtgctctccaccatacagtaaagcagccaaaatcctcacg
cagcattcagattctgcaaaatcaaaccccaatctgatcactggtgtttcaaaaacaggc
tttcctaaagagaagaatgctttgtctttaaaagatcgagccactatggaaagtttagaa
gcttttcccaaagctaaaagtgtgcctttgttaaacgccgccatacaattgcaagaacaa
ataaagagaacttctaaccctggaggggaattttcatctcctgacagcattcaggaaatt
gaaaatgtgatgttactagaaaaacatctgcgggggctaagcttagagagctatagagaa
gatctccaaagttataaggacccaccaactgcagcagataaagtcaaggattcaggaagt
tctttgaggctgtgcactgaagtgctaaaagtgagtcctttagaaaacgaacagcaaatt
ttgctccctaggtcaaataaagtcctagataactgtcagattgaggggaaatctgtgcca
agaatcacgaaaagctcacttaagagtgtgtgccaaaataatgatcctgctgatgacagt
gatagcgaaaatgtggagggcaggtggaaaggtcatagcatctcaaaacaacaacgaaag
gctcatacggttcagcccaaggacaagtgcaatggcaaaagagacaccaagaaattggca
tttaagattcagccagaaccaaaagggaaagttgagcacgctcttaaattactcaacgct
gatttatccacagaagagcatctgcttctacctctctccaagtctgtatccatttcaaat
tatgggcttttacttcaggctggaatggcccccagtggcagttctggatacccattgttg
atcaagagtcagcacttgagagatcagtcttggcacaacgcaactcctaatagtgatggt
gatcagatcaagaggtttgctgtcaagaaaatgaactggaccgagcagtacgcctgtgag
aaattgtgtagccttctgacttactatgacatgaacagaaagaagtgtggccatactgat
ccgaagcagctgcaggccctgcggtaa
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