Thamnophis sirtalis (common garter snake): 106551067
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Entry
106551067 CDS
T06107
Symbol
PSMC5
Name
(RefSeq) 26S protease regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
106551067 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsr03051
]
106551067 (PSMC5)
Proteasome [BR:
tsr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
106551067 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
PhoH
FapA
AAA_17
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
Sigma54_activat
bpMoxR
DUF7006
DUF5906
RNA_helicase
ABC_tran
Zeta_toxin
AAA_19
TsaE
AAA_11
HR1
Motif
Other DBs
NCBI-GeneID:
106551067
NCBI-ProteinID:
XP_013924551
UniProt:
A0A6I9YK70
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAVEGPEQMDLDEGKGGTGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagaggggccggagcagatggacctggatgagggcaagggtggtacaggcctg
cgccagtattatctgtccaagattgaggagttgcagttgatagtcaatgataagagtcag
aatctaaggcgactgcaggctcagaggaatgaacttaatgccaaagtacgcctgcttcgt
gaggaattgcagcttctgcaggagcagggttcctatgtgggtgaagtggtgagggctatg
gacaaaaaaaaggtgctagtcaaggttcatccagaaggcaagtttgtggttgatgtggac
aaaaacatagacatcaatgatgtgacaccaaattgccgtgttgctctgaggaatgatagc
tacacactgcataagatactaccaaacaaagtggatcctctagtttcattgatgatggtg
gagaaagttccagattccacctatgagatgattggtggccttgacaagcaaatcaaagag
attaaggaagtgattgagcttccagttaaacatccagagctttttgaagctttgggcatt
gctcaaccgaagggtgtgctattgtatggaccccctggcactggaaaaactttgctggcc
cgggctgtggctcatcacactgactgtactttcatccgtgtctctggctctgagcttgtg
cagaaattcattggagaaggtgcacgaatggtacgtgagctgtttgtcatggcacgggaa
catgctccttccatcatcttcatggatgagatagactccataggttcttctcgcttggaa
ggtggatctggtggggacagtgaagttcagcgtacaatgttggaattgctcaaccagctt
gatggttttgaagctactaagaacatcaaggtaattatggcaaccaatcgcatagacatc
ttggattcagccctgcttcgtcctggccgcattgatagaaaaattgaattcccacctcca
aatgaagaggctcgtctagacatcctgaagattcattctcgtaagatgaatctgacaaga
ggaatcaatctgcggaagattgcagaactaatgccgggggcttccggggctgaggtcaag
ggtgtatgtacagaggctggaatgtatgcactgagagagaggagagtacacgtgactcaa
gaagactttgaaatggctgtagcaaaggttatgcaaaaagacagtgagaagaacatgtct
atcaagaagctctggaagtaa
DBGET
integrated database retrieval system
