Thamnophis sirtalis (common garter snake): 106551188
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Entry
106551188 CDS
T06107
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03460
Fanconi anemia pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106551188 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
106551188 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106551188 (FANCL)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106551188 (FANCL)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106551188 (FANCL)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106551188 (FANCL)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
106551188 (FANCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-RING-like
zf-ANAPC11
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
106551188
NCBI-ProteinID:
XP_013924706
UniProt:
A0A6I9YKM5
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MATGFGSLLRECPLLLPQNREKSVYEGFVTAQGRDFHIRILLPTDGQLKNARIQCSWHMK
KLLHGYHLILKQRLKHSSDLISFMVELKTILELALKNTEELCAQPPPQYYSGLIGDIENL
GWNKVLFIDPAFSTIRLKAEDSSSRDHQITLKINSKYPREQPDCLTDLPVQFSFSWTPQS
SLLSIHSQFLATLESLKEFWDILDEIDEKTWVLEPEKPTRSSTRRRIAIGSNISLNIEVD
PRHPTMLPECYFLGADHVVNPLKIKLNSNVHMWNPENSLLKNLKEILEIDFPSREALEKT
DFSMDCGICYAYRLDGAIPDQVCDDSHCGQTFHQVCLYEWLRGLPSSRQSFNVIFGECPY
CSKQITLKISTKKI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctactggattcgggtcattgctgcgcgagtgcccgctcctcttgccccagaaccgg
gaaaagagtgtctatgagggcttcgtcaccgcccaggggagagactttcacataaggata
ttgttaccaacagatggtcagttgaaaaatgctaggattcaatgtagctggcatatgaaa
aagttgcttcatggatatcatctgattttaaagcagagattgaaacattcttcagatcta
atcagtttcatggtagagttgaagactattttggaacttgctttgaaaaacacagaagaa
ttgtgtgctcaaccacctccacaatattattctggcctcatcggagatatagaaaatttg
ggatggaataaggttctgtttattgatcctgcttttagtactatcaggttaaaagctgaa
gattcttctagtcgcgatcatcaaatcactctgaaaataaattcaaaatatcccagagag
caaccagactgtcttactgatttaccagttcagttttctttctcctggactccacagagt
tccttactgagcattcacagtcagttcttggcaacattagaatcactgaaggagttttgg
gatattctagatgaaattgatgagaagacctgggtccttgagccagagaaacccacaagg
agctccacaaggcgaaggattgcaattggaagcaacatttcccttaatatagaggtagat
cccagacaccctaccatgcttcctgagtgttactttcttggagctgaccatgtggtaaat
ccgttgaaaatcaagctgaatagcaatgtacatatgtggaacccggaaaatagtttatta
aaaaatttaaaagagattttagaaattgattttccatctcgagaagctctagaaaaaact
gacttctctatggattgtggtatttgctatgcttatcgtctagatggggctattccagac
caggtctgtgatgactctcattgtggtcaaacttttcatcaagtttgtttatatgagtgg
ttacgtgggctcccttcaagtcgacaaagttttaatgtcatatttggtgaatgtccatat
tgtagtaagcaaatcacactgaaaatatctactaagaaaatctga
DBGET
integrated database retrieval system
