Thamnophis sirtalis (common garter snake): 106551236
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Entry
106551236 CDS
T06107
Symbol
NFKBIA
Name
(RefSeq) NF-kappa-B inhibitor alpha
KO
K04734
NF-kappa-B inhibitor alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04210
Apoptosis
tsr04620
Toll-like receptor signaling pathway
tsr04621
NOD-like receptor signaling pathway
tsr04622
RIG-I-like receptor signaling pathway
tsr04623
Cytosolic DNA-sensing pathway
tsr04625
C-type lectin receptor signaling pathway
tsr04920
Adipocytokine signaling pathway
tsr05132
Salmonella infection
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106551236 (NFKBIA)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106551236 (NFKBIA)
04621 NOD-like receptor signaling pathway
106551236 (NFKBIA)
04622 RIG-I-like receptor signaling pathway
106551236 (NFKBIA)
04623 Cytosolic DNA-sensing pathway
106551236 (NFKBIA)
04625 C-type lectin receptor signaling pathway
106551236 (NFKBIA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
106551236 (NFKBIA)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106551236 (NFKBIA)
09171 Infectious disease: bacterial
05132 Salmonella infection
106551236 (NFKBIA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106551236 (NFKBIA)
04131 Membrane trafficking [BR:
tsr04131
]
106551236 (NFKBIA)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
106551236 (NFKBIA)
Membrane trafficking [BR:
tsr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106551236 (NFKBIA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
OAF_C
Ank_3
Ank_5
Ank_4
ANK_LRRK2
CLAMP
Motif
Other DBs
NCBI-GeneID:
106551236
NCBI-ProteinID:
XP_013924769
UniProt:
A0A6I9YL55
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MDFTMDGHPREVLKKDRQLSLIQDDRHDSGLGSMKDDEFENLVRELEDIRIQPVEADSGN
LAQPWKQLVTEDGDTILHLAIIHEKKSLSLEIVHQAGRDASFLNFQNNLNQTPLHLAAIT
DQPEIAESLLKAGCDAEIRDFRGNTPLHIACKQGSLRGVNVLIQYCQKPQLHSLLQAANY
SGHTCLHLASIQGYLAIVERLLSLGADVNAQEPCNGRTALHLAVDLQNEGLVSLLLKHGA
DVNKVTYQGYSPYQLTWGRNNSFIQEQLRQFTTLDLQMLSESEDEESCESELEYTEDEVS
CVQLEFPNNFHIFFYEARSMKMHXSYILQEYKSLVFSPIERVDGSMFEVLPQSADLPGLQ
HCRLCADRWKPCICSYALNIEWYPCMLKYCKSRDVAGKATSYKCGIRSCQKAYSFDYYVP
QKQLCLWDEET
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggattttacaatggacgggcatccccgggaggtgttgaagaaggacaggcagctcagc
ctgatccaggacgacaggcacgacagcggcttaggctccatgaaagacgacgagttcgaa
aatctcgtccgggaattggaggatatccgaatccagcccgtggaagccgactcggggaac
ttagcccagccttggaagcagctggtgactgaagatggagacacgattctccatctggct
attattcacgaaaaaaaatccttaagtttggaaatcgttcaccaagcaggacgggatgct
tctttcttgaatttccagaacaatctcaaccagactccacttcatttggcggcaatcaca
gatcagcctgaaattgctgagtctcttctgaaagcaggctgtgatgcagaaatcagagat
ttccgaggaaacacaccgctgcacattgcttgtaaacaagggtcgctcagaggagttaat
gttcttatacagtattgccagaagccccaactccattctcttctacaagcagcaaactac
agcggccacacgtgtctccacctggcttctattcaaggatacttggccattgtagaacgt
cttctgtccttgggagcagatgtcaatgctcaggagccatgcaatggtaggactgccttg
catttggccgtagatttgcagaatgaaggactggtttcccttttgttgaagcatggagca
gatgtgaacaaagtaacctaccagggctattctccataccagctcacatggggaagaaat
aactccttcatacaggaacagttgagacaatttaccacactggatttgcagatgctatca
gagagtgaagatgaagaaagctgtgaatcagaattggaatatacggaagatgaagtaagt
tgtgtgcagctagaattccccaataattttcacatatttttctatgaggcaagaagtatg
aaaatgcattgnagttacatacttcaagaatataaaagtcttgtgttttcccccattgaa
agggtggacggctccatgtttgaggtcctgcctcagtctgccgatttgcctggcctgcag
cactgccggctctgtgcagaccgctggaaaccatgtatctgcagctacgccttgaacatt
gagtggtatccctgcatgctgaagtactgcaagagccgggatgtggctggaaaggcgacc
tcttacaagtgtggcatccgcagctgccagaaggcctacagctttgattactacgtgccc
cagaagcagctgtgcctgtgggatgaagagacttag
DBGET
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