Thamnophis sirtalis (common garter snake): 106551305
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Entry
106551305 CDS
T06107
Symbol
LRRC8D
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106551305 (LRRC8D)
Ion channels [BR:
tsr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
106551305 (LRRC8D)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_At5g56370
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
106551305
NCBI-ProteinID:
XP_013924860
UniProt:
A0A6I9YKV2
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MFTLAEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLQS
AVSAKMQPSSLGSAKATNMPESETIQDKDKQASMAVSLDTTPVTTPDVRTTDYPPLHSTA
ASQEAKKEQKDFLGRKTNLDYQQYVFINQMCYHVALPWYSKYFPYLALIHTIILMVSSNF
WFKYPKTCSKIEHFVSILGKCFESPWTTKALSETACEDSEENKQRLTGAQSLPKHVSTSS
DEGSPNASTPMINKTGFKFSAEKPVIEVPGMTILDKKDGEQAKALFEKVRKFRAHVEDSD
LIYKLYVVQTVIKTVKFIFILCYTANFVNEISFEHICMPKVEHLTGYQEFECTHNMAYML
KKLLISYISLICVYGFVCLYTLFWLFRLPLKEYSFEKVREESSFSDIPDVKNDFAFLLHM
VDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLSGV
PDAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLYHCPAKVEQTAFSFLRDHLRCL
HVKFTDVAEIPAWVYLLKNLRELYLVGNLNSENNKMIGLESLRELRHLKILYVKSNLTKI
PSNITDVAPHLTKLVIHNDGTKLFVLNSLKKMMNVAELELQNCELERIPHAIFSLTNLQE
LDLKSNSIRTIEEVISFQHLKRLTCLKLWHNKIVNIPSSITHVKNLESLYLSNNKLESLP
VAVFSLQKLRCLDVSYNSIAVIPVEIGLLQNLQHLHITGNKVEVLPKQLFKCSKLRTLSL
GQNCITSIPEKIGQLLQLTNLELKGNCLDRLPATLGQCRLLRKSGLIVEDHLFDTLSSEV
KEALNQDTSIPFANGI
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccttgcagaagttgcatctctgaatgacatacagccaacttaccgaattctg
aaaccatggtgggatgtatttatggattatctggcagttgtaatgctaatggttgccatc
tttgctggaaccatgcagttgaccaaagatcaggtggtttgtttgcctgtgttacagtct
gctgtaagtgcgaaaatgcaacccagctccttgggaagtgccaaagctacaaatatgcca
gagtccgaaactattcaggacaaagacaaacaggcatccatggctgtatctcttgacacg
acacctgtcactacgcctgatgtacgtacaactgactatcccccattacactcaactgct
gcaagtcaggaagcaaagaaggaacagaaagatttcctgggccgtaagactaacttggat
tatcagcaatatgttttcattaaccagatgtgttatcatgtggctcttccttggtattca
aagtactttccctacctagctcttatacacacaattattttgatggtcagtagcaatttt
tggtttaaataccccaaaacctgctcaaaaattgagcattttgtctctattttaggaaaa
tgctttgaatccccttggactacaaaagcgttgtctgaaacggcatgtgaggactctgag
gagaataaacagagactaactggagcccaatccctgccaaagcatgtctcaactagtagt
gatgaaggaagtccaaatgccagtacccccatgataaacaagactggtttcaagttttca
gcagaaaagccagttattgaagtcccgggtatgaccattttggacaaaaaagatggagag
caagccaaagcactctttgaaaaagtacggaaattccgggcccacgtggaggacagcgat
ttgatttataaactctacgttgttcagactgtcatcaaaactgtaaaattcatatttatt
ctctgctacacagcaaattttgtcaatgaaatcagctttgagcatatttgcatgcccaaa
gtggaacatctgactggctaccaagaatttgaatgcacccacaatatggcttacatgtta
aaaaagttgcttattagttatatttctctcatctgtgtctatggttttgtctgtctgtac
actctcttctggttgtttcggttacccctcaaggagtactcttttgaaaaagttagagag
gagagcagtttcagcgatattccagatgttaaaaatgattttgcttttctcttgcacatg
gttgaccagtacgatcagctatactccaagaggtttggtgtatttctgtcagaggtcagt
gaaaataaactgagggaaataagtttgaaccacgaatggacttttgagaaattgaggcaa
cacgtttctcgcaatgctcaggataagcaagaattacatcttttcatgctatcgggagtc
ccggatgcggtttttgacttgacagatttagatgtgttaaagcttgagctgattcctgaa
gcaaaaatccctgctaaaatatcccagatgactaaccttcaagagctacatctctatcat
tgccctgccaaggtggagcagacagccttcagttttcttcgggaccacctgagatgcctg
catgtgaaatttactgatgttgcagagataccagcttgggtatacttacttaaaaatctc
cgagagttgtatttggtaggcaacttgaattctgaaaacaataaaatgataggacttgaa
tcgcttagagaattaaggcaccttaagattctctatgtgaaaagcaatttgaccaaaatt
ccatctaacatcacagatgtagcaccacatctaaccaagctggtcattcacaatgatggt
accaagctttttgtactgaatagccttaagaaaatgatgaatgtagcagaattagagctg
cagaactgtgaactggaacgtattccccatgccatttttagtctcactaacttgcaggaa
ctagacctaaagtcaaacagtatacgcacaattgaagaagtcatcagcttccaacattta
aaaagactaacttgtctgaaattgtggcacaataaaatagttaacattccttcttccatt
acccatgttaaaaacttggagtcgctttatctctccaataataaactcgaatccttacct
gttgcagtattcagtttacaaaaactcagatgcttggatgtaagctacaactccatcgcg
gtgattcctgtggaaatagggttgcttcaaaatctccagcacttgcatatcacaggaaat
aaagtggaagttttgccaaaacaactgtttaagtgctccaagttgagaactttgagtttg
ggacaaaattgcatcacctcaattccagaaaaaattggccagctgttgcaactaactaac
ttagagctgaaggggaactgtttagatcgtctaccagctactttgggtcagtgtcggctt
ctcaggaaaagtggactaattgtagaagatcatctttttgatacattgtcctcagaagtg
aaagaagcattgaatcaagatacaagcattccctttgctaatgggatttaa
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