KEGG   Thamnophis sirtalis (common garter snake): 106551351
Entry
106551351         CDS       T06107                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04115  p53 signaling pathway
tsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106551351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106551351
Enzymes [BR:tsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106551351
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106551351
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106551351
SSDB
Motif
Pfam: zf-C3HC4_2 Beta-prop_RIG_2nd zf-C3HC4 zf-RING_2 WD40 zf-RING_5 zf-RING_UBOX zf-rbx1 zf-C3HC4_3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd zf-RING_4 zf-C3HC4_4 Beta-prop_EML_2 zf_C2H2_10 RING_XB3-XBAT31 zf-RING_10 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Prok-RING_4 Beta-prop_WDR35_TULP_N WD40_Prp19 Beta-prop_IFT140_1st TRAF3_RING DZR IBR_1
Other DBs
NCBI-GeneID: 106551351
NCBI-ProteinID: XP_013924921
UniProt: A0A6I9YLA7
LinkDB
Position
Unknown
AA seq 374 aa
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE
EKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILM
EFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSI
IDSTEYSQPSGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRLSDDSRT
SNQLDEFQECLFKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI
KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR
SKVYQGCSIYQSDE
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgattgaagaagcttacatgacaaaatgtggacacagtttctgttacaaatgtattcat
caaagcctagaagataacaatagatgtcccaaatgtaattacgttgtggataacattgat
catctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaagatttgag
gaaaagagattcaaattggaccattcaaatgggcacaggtggcaaatatttcaagatttg
ttgggaacagaccaagacaatcttgatttggccaatgttaacttaatgttggaacttctg
gtgcagaagaaaaaacaactggaggcagagtctcatgctgcccagctacagattttgatg
gaattcctcaaggttgccaggagaaataagagagagcagttagagcaaatccagaaggag
ctgagtgttttggaagaagatattaaacgagtagaggaaatgagtggcttgtattcacca
gtcagcgaagacagcactgtgccccagtttgaagcgccatccccttcacacagtagcatt
attgattctacagaatatagccaaccttctggatttagtggcagttcccagactaagaaa
cagccgtggtataatagtaccttggcttcaaggaggaaaagacttacagctcattttgaa
gatttggaacaatgctacttttctaccaggatgacccgtctatcagatgatagtagaacc
tcaaaccagctggatgaatttcaagagtgcctgtttaagtttactcgctacaattctgtt
cgacctttggcaacactgtcttatgcaagtgatctctacaacggatctagcatagtctca
agtattgaatttgatcgagactgtgactattttgctattgcgggagtcacaaagaagatt
aaagtctatgaatatggcacagtcattcaggatgcagttgatattcattatccagaaaat
gaaatgacatgtaattccaaaatcagctgtatcagctggagtagttaccacaaaaacctt
ttggccagcagtgactatgaaggaacagtgatcttatgggatggattcacaggtcaacgt
tcaaaggtctatcagggttgctcgatctaccagtctgatgagtga

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