KEGG   Thamnophis sirtalis (common garter snake): 106551351
Entry
106551351         CDS       T06107                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04115  p53 signaling pathway
tsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106551351
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    106551351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsr04121]
    106551351
Enzymes [BR:tsr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106551351
Ubiquitin system [BR:tsr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106551351
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106551351
SSDB
Motif
Pfam: zf-C3HC4_2 Beta-prop_RIG_2nd zf-C3HC4 zf-RING_2 WD40 zf-RING_5 zf-RING_UBOX zf-rbx1 zf-C3HC4_3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd zf-RING_4 zf-C3HC4_4 Beta-prop_EML_2 zf_C2H2_10 RING_XB3-XBAT31 zf-RING_10 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Prok-RING_4 Beta-prop_WDR35_TULP_N WD40_Prp19 Beta-prop_IFT140_1st TRAF3_RING DZR IBR_1
Other DBs
NCBI-GeneID: 106551351
NCBI-ProteinID: XP_013924921
UniProt: A0A6I9YLA7
LinkDB
Position
Unknown
AA seq 374 aa
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE
EKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILM
EFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSI
IDSTEYSQPSGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRLSDDSRT
SNQLDEFQECLFKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI
KVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR
SKVYQGCSIYQSDE
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgattgaagaagcttacatgacaaaatgtggacacagtttctgttacaaatgtattcat
caaagcctagaagataacaatagatgtcccaaatgtaattacgttgtggataacattgat
catctatatcccaactttttagtgaatgagctcatccttaaacagaagcaaagatttgag
gaaaagagattcaaattggaccattcaaatgggcacaggtggcaaatatttcaagatttg
ttgggaacagaccaagacaatcttgatttggccaatgttaacttaatgttggaacttctg
gtgcagaagaaaaaacaactggaggcagagtctcatgctgcccagctacagattttgatg
gaattcctcaaggttgccaggagaaataagagagagcagttagagcaaatccagaaggag
ctgagtgttttggaagaagatattaaacgagtagaggaaatgagtggcttgtattcacca
gtcagcgaagacagcactgtgccccagtttgaagcgccatccccttcacacagtagcatt
attgattctacagaatatagccaaccttctggatttagtggcagttcccagactaagaaa
cagccgtggtataatagtaccttggcttcaaggaggaaaagacttacagctcattttgaa
gatttggaacaatgctacttttctaccaggatgacccgtctatcagatgatagtagaacc
tcaaaccagctggatgaatttcaagagtgcctgtttaagtttactcgctacaattctgtt
cgacctttggcaacactgtcttatgcaagtgatctctacaacggatctagcatagtctca
agtattgaatttgatcgagactgtgactattttgctattgcgggagtcacaaagaagatt
aaagtctatgaatatggcacagtcattcaggatgcagttgatattcattatccagaaaat
gaaatgacatgtaattccaaaatcagctgtatcagctggagtagttaccacaaaaacctt
ttggccagcagtgactatgaaggaacagtgatcttatgggatggattcacaggtcaacgt
tcaaaggtctatcagggttgctcgatctaccagtctgatgagtga

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